Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 MIR5087-201ENST00000635826 76 ntBASIC0.34□□□□□ -2.36
RPL28P46779 OR5AK4P-201ENST00000635912 903 ntBASIC0.34□□□□□ -2.36
RPL28P46779 AL442644.1-201ENST00000454390 3105 ntBASIC0.34□□□□□ -2.36
RPL28P46779 ZNF204P-201ENST00000416749 2397 ntBASIC0.34□□□□□ -2.36
RPL28P46779 RNU6-1317P-201ENST00000364582 104 ntBASIC0.33□□□□□ -2.36
RPL28P46779 RNU6-1335P-201ENST00000365426 107 ntBASIC0.33□□□□□ -2.36
RPL28P46779 Y_RNA.560-201ENST00000384689 102 ntBASIC0.33□□□□□ -2.36
RPL28P46779 U8.16-201ENST00000391279 133 ntBASIC0.33□□□□□ -2.36
RPL28P46779 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.33□□□□□ -2.36
RPL28P46779 MIR450B-201ENST00000401182 78 ntBASIC0.33□□□□□ -2.36
RPL28P46779 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.33□□□□□ -2.36
RPL28P46779 RNU2-9P-201ENST00000410194 145 ntBASIC0.33□□□□□ -2.36
RPL28P46779 BX295541.1-201ENST00000417774 250 ntBASIC0.33□□□□□ -2.36
RPL28P46779 CALM2P4-201ENST00000430810 426 ntBASIC0.33□□□□□ -2.36
RPL28P46779 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.33□□□□□ -2.36
RPL28P46779 MTND4P32-201ENST00000437189 1237 ntBASIC0.33□□□□□ -2.36
RPL28P46779 SNRPGP9-201ENST00000456025 225 ntBASIC0.33□□□□□ -2.36
RPL28P46779 snoU13.25-201ENST00000458945 104 ntBASIC0.33□□□□□ -2.36
RPL28P46779 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.33□□□□□ -2.36
RPL28P46779 SCARNA1-201ENST00000517138 166 ntBASIC0.33□□□□□ -2.36
RPL28P46779 FRG2DP-202ENST00000566967 323 ntBASIC0.33□□□□□ -2.36
RPL28P46779 MIR5000-201ENST00000577717 103 ntBASIC0.33□□□□□ -2.36
RPL28P46779 MTND1P15-201ENST00000579262 949 ntBASIC0.33□□□□□ -2.36
RPL28P46779 MTATP6P3-201ENST00000581686 676 ntBASIC0.33□□□□□ -2.36
RPL28P46779 ELL2P3-201ENST00000457883 1602 ntBASIC0.33□□□□□ -2.36
RPL28P46779 RNU6-245P-201ENST00000384020 107 ntBASIC0.32□□□□□ -2.36
RPL28P46779 MIR487A-201ENST00000385009 80 ntBASIC0.32□□□□□ -2.36
RPL28P46779 AL049545.1-201ENST00000401856 572 ntBASIC0.32□□□□□ -2.36
RPL28P46779 MIR548J-201ENST00000408833 112 ntBASIC0.32□□□□□ -2.36
RPL28P46779 LINC01399-202ENST00000458450 244 ntBASIC0.32□□□□□ -2.36
RPL28P46779 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.32□□□□□ -2.36
RPL28P46779 CCDC34P1-201ENST00000507441 517 ntBASIC0.32□□□□□ -2.36
RPL28P46779 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.32□□□□□ -2.36
RPL28P46779 RNA5SP220-201ENST00000516298 104 ntBASIC0.32□□□□□ -2.36
RPL28P46779 Y_RNA.676-201ENST00000516393 96 ntBASIC0.32□□□□□ -2.36
RPL28P46779 AC027419.1-201ENST00000522976 328 ntBASIC0.32□□□□□ -2.36
RPL28P46779 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
RPL28P46779 AL096861.1-201ENST00000610899 123 ntBASIC0.32□□□□□ -2.36
RPL28P46779 AC087683.2-201ENST00000611384 326 ntBASIC0.32□□□□□ -2.36
RPL28P46779 HULC.1-201ENST00000612720 240 ntBASIC0.32□□□□□ -2.36
RPL28P46779 FER-210ENST00000628534 558 ntTSL 5 BASIC0.32□□□□□ -2.36
RPL28P46779 RNU6-1120P-201ENST00000362988 108 ntBASIC0.31□□□□□ -2.36
RPL28P46779 SNORD115-8-201ENST00000363856 82 ntBASIC0.31□□□□□ -2.36
RPL28P46779 SNORD115-38-201ENST00000365037 82 ntBASIC0.31□□□□□ -2.36
RPL28P46779 RNU6-945P-201ENST00000383947 107 ntBASIC0.31□□□□□ -2.36
RPL28P46779 SNORA50A-201ENST00000384225 134 ntBASIC0.31□□□□□ -2.36
RPL28P46779 RNU6-784P-201ENST00000384330 106 ntBASIC0.31□□□□□ -2.36
RPL28P46779 MIR10B-201ENST00000385011 110 ntBASIC0.31□□□□□ -2.36
RPL28P46779 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.31□□□□□ -2.36
RPL28P46779 AC114737.2-201ENST00000421583 173 ntBASIC0.31□□□□□ -2.36
RPL28P46779 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.31□□□□□ -2.36
RPL28P46779 USP9YP29-201ENST00000445112 563 ntBASIC0.31□□□□□ -2.36
RPL28P46779 HSFY5P-201ENST00000453726 309 ntBASIC0.31□□□□□ -2.36
RPL28P46779 AC093850.1-201ENST00000454121 251 ntBASIC0.31□□□□□ -2.36
RPL28P46779 U7.7-201ENST00000459276 60 ntBASIC0.31□□□□□ -2.36
RPL28P46779 OR9P1P-201ENST00000496431 281 ntBASIC0.31□□□□□ -2.36
RPL28P46779 RNA5SP54-201ENST00000516951 92 ntBASIC0.31□□□□□ -2.36
RPL28P46779 RNU6-1223P-201ENST00000517124 104 ntBASIC0.31□□□□□ -2.36
RPL28P46779 MTND1P35-201ENST00000526739 508 ntBASIC0.31□□□□□ -2.36
RPL28P46779 AK6P2-201ENST00000549020 471 ntBASIC0.31□□□□□ -2.36
RPL28P46779 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.31□□□□□ -2.36
RPL28P46779 MIR4714-201ENST00000580728 77 ntBASIC0.31□□□□□ -2.36
RPL28P46779 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.31□□□□□ -2.36
RPL28P46779 uc_338.34-201ENST00000617467 174 ntBASIC0.31□□□□□ -2.36
RPL28P46779 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.31□□□□□ -2.36
RPL28P46779 RNU6-1329P-201ENST00000365664 107 ntBASIC0.3□□□□□ -2.36
RPL28P46779 RNU6-163P-201ENST00000384396 106 ntBASIC0.3□□□□□ -2.36
RPL28P46779 RNA5SP219-201ENST00000390940 113 ntBASIC0.3□□□□□ -2.36
RPL28P46779 SNORD99-201ENST00000408612 74 ntBASIC0.3□□□□□ -2.36
RPL28P46779 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.3□□□□□ -2.36
RPL28P46779 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.3□□□□□ -2.36
RPL28P46779 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC0.3□□□□□ -2.36
RPL28P46779 RPL23AP75-201ENST00000491601 451 ntBASIC0.3□□□□□ -2.36
RPL28P46779 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.3□□□□□ -2.36
RPL28P46779 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.3□□□□□ -2.36
RPL28P46779 AC091133.4-201ENST00000511142 308 ntBASIC0.3□□□□□ -2.36
RPL28P46779 AC022868.1-201ENST00000517767 391 ntBASIC0.3□□□□□ -2.36
RPL28P46779 AC087854.1-201ENST00000519706 414 ntBASIC0.3□□□□□ -2.36
RPL28P46779 DEFB108E-201ENST00000524692 240 ntBASIC0.3□□□□□ -2.36
RPL28P46779 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.3□□□□□ -2.36
RPL28P46779 AC011604.1-201ENST00000545978 196 ntBASIC0.3□□□□□ -2.36
RPL28P46779 SUB1P2-201ENST00000556401 297 ntBASIC0.3□□□□□ -2.36
RPL28P46779 AC025627.3-201ENST00000582078 182 ntBASIC0.3□□□□□ -2.36
RPL28P46779 MIR4424-201ENST00000585257 86 ntBASIC0.3□□□□□ -2.36
RPL28P46779 AC005014.3-201ENST00000605985 190 ntBASIC0.3□□□□□ -2.36
RPL28P46779 AL360219.1-201ENST00000610230 366 ntBASIC0.3□□□□□ -2.36
RPL28P46779 AC079248.2-201ENST00000623779 326 ntBASIC0.3□□□□□ -2.36
RPL28P46779 RNU6-1266P-201ENST00000362794 105 ntBASIC0.29□□□□□ -2.36
RPL28P46779 RNU4-21P-201ENST00000362802 126 ntBASIC0.29□□□□□ -2.36
RPL28P46779 RNU6-553P-201ENST00000364047 96 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.29□□□□□ -2.36
RPL28P46779 MTCYBP8-201ENST00000422855 651 ntBASIC0.29□□□□□ -2.36
RPL28P46779 MRPS10P1-201ENST00000448483 130 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AC233266.1-201ENST00000454518 96 ntBASIC0.29□□□□□ -2.36
RPL28P46779 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.29□□□□□ -2.36
RPL28P46779 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.29□□□□□ -2.36
RPL28P46779 MTND1P22-201ENST00000510572 951 ntBASIC0.29□□□□□ -2.36
RPL28P46779 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.29□□□□□ -2.36
RPL28P46779 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.29□□□□□ -2.36
RPL28P46779 RNU7-28P-201ENST00000516759 62 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms