Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 Y_RNA.485-201ENST00000384395 102 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 AL033519.2-201ENST00000403958 392 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 AC123900.1-201ENST00000420390 96 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.27□□□□□ -2.05
PTPN9P43378 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.27□□□□□ -2.05
PTPN9P43378 AC245102.2-201ENST00000448956 180 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.27□□□□□ -2.05
PTPN9P43378 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.27□□□□□ -2.05
PTPN9P43378 AL139109.1-201ENST00000455491 297 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 HMGN2P9-201ENST00000476875 229 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 AC079804.2-201ENST00000490376 200 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.27□□□□□ -2.05
PTPN9P43378 AC008413.1-201ENST00000511864 177 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 Y_RNA.713-201ENST00000517013 96 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.27□□□□□ -2.05
PTPN9P43378 SNORD53-201ENST00000579969 78 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 AL390123.1-201ENST00000603216 237 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 AL353621.2-201ENST00000605340 133 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.27□□□□□ -2.05
PTPN9P43378 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.27□□□□□ -2.05
PTPN9P43378 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
PTPN9P43378 RNU6-823P-201ENST00000391042 103 ntBASIC2.26□□□□□ -2.05
PTPN9P43378 AL135786.1-201ENST00000415892 214 ntBASIC2.26□□□□□ -2.05
PTPN9P43378 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.26□□□□□ -2.05
PTPN9P43378 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN9P43378 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN9P43378 AC104695.3-201ENST00000604052 296 ntBASIC2.26□□□□□ -2.05
PTPN9P43378 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.26□□□□□ -2.05
PTPN9P43378 AC040896.1-201ENST00000613819 479 ntBASIC2.26□□□□□ -2.05
PTPN9P43378 U6.92-201ENST00000636464 89 ntBASIC2.26□□□□□ -2.05
PTPN9P43378 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
PTPN9P43378 RNU1-91P-201ENST00000364746 163 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 Y_RNA.415-201ENST00000384012 112 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 Y_RNA.455-201ENST00000384230 98 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 SNORA51.11-201ENST00000384442 131 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 RNU6-1160P-201ENST00000384546 104 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 Y_RNA.551-201ENST00000384661 102 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 MIR29C-201ENST00000385231 88 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 RNU6-101P-201ENST00000410323 104 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.25□□□□□ -2.05
PTPN9P43378 AL357134.1-201ENST00000445848 426 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 UQCRBP2-201ENST00000447827 297 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 SNORA40.9-201ENST00000515895 93 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 SNORA4.4-201ENST00000515921 135 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 AC009127.3-201ENST00000570531 403 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 MIR3126-201ENST00000577443 74 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.25□□□□□ -2.05
PTPN9P43378 AC245884.12-201ENST00000615364 59 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 AL078596.1-201ENST00000624856 447 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 AC131280.1-202ENST00000624067 4211 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 MTND4P1-201ENST00000457501 1466 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 ZNF72P-201ENST00000425869 1908 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.25□□□□□ -2.05
PTPN9P43378 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PTPN9P43378 RNU6-545P-201ENST00000362681 104 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 RNU6-743P-201ENST00000364151 106 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 RNU6-1264P-201ENST00000383891 107 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 RNU6-975P-201ENST00000384296 105 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 SNORD14D-201ENST00000384390 87 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 SNORA40.19-201ENST00000390846 128 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
PTPN9P43378 MIR1252-201ENST00000408861 65 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 RNU6-985P-201ENST00000410182 104 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 ELOCP21-201ENST00000412558 336 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 TOMM22P2-201ENST00000430735 237 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.24□□□□□ -2.05
PTPN9P43378 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.24□□□□□ -2.05
PTPN9P43378 RPL26P26-201ENST00000480251 434 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 AC010469.2-201ENST00000496412 480 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 AC067942.3-201ENST00000512025 362 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 RNU6-991P-201ENST00000516168 107 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 AC240442.1-201ENST00000616055 283 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 AL162373.1-201ENST00000620433 407 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 AC064859.1-201ENST00000624741 174 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 AC099654.10-201ENST00000640395 161 ntBASIC2.24□□□□□ -2.05
PTPN9P43378 RNU6-727P-201ENST00000363592 107 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 RNU6-1305P-201ENST00000364353 104 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 Y_RNA.389-201ENST00000383924 113 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 RNU6-708P-201ENST00000384217 107 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 Y_RNA.458-201ENST00000384240 102 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 RNU6-1235P-201ENST00000384559 107 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.23□□□□□ -2.05
PTPN9P43378 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 MTCO1P44-201ENST00000441935 243 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 RNU1-131P-201ENST00000458943 161 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 U8.20-201ENST00000459445 131 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 RNU6-498P-201ENST00000459468 107 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 AC090255.1-201ENST00000495779 349 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 RNU6-948P-201ENST00000516374 107 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 SCARNA15.1-201ENST00000516384 125 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 RNU1-117P-201ENST00000517041 158 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 Y_RNA.715-201ENST00000517082 110 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 AC018448.1-201ENST00000552843 316 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 MIR1273D-201ENST00000577266 86 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 AC113195.1-201ENST00000579952 141 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 MIR4659A-201ENST00000580269 81 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 AL355297.3-201ENST00000604082 446 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 AC124312.5-201ENST00000604451 268 ntBASIC2.23□□□□□ -2.05
PTPN9P43378 AL021879.1-201ENST00000611756 288 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms