Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AL512360.1-201ENST00000555346 234 ntBASIC1.09□□□□□ -2.23
SSR1P43307 AL021879.1-201ENST00000611756 288 ntBASIC1.09□□□□□ -2.23
SSR1P43307 MIR8065-201ENST00000620577 100 ntBASIC1.09□□□□□ -2.23
SSR1P43307 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.09□□□□□ -2.23
SSR1P43307 AC099654.5-201ENST00000636479 350 ntBASIC1.09□□□□□ -2.23
SSR1P43307 SNORA72.2-201ENST00000365028 127 ntBASIC1.08□□□□□ -2.24
SSR1P43307 RNU6-259P-201ENST00000383999 107 ntBASIC1.08□□□□□ -2.24
SSR1P43307 RNU6-95P-201ENST00000384697 107 ntBASIC1.08□□□□□ -2.24
SSR1P43307 RNU6-1031P-201ENST00000384773 107 ntBASIC1.08□□□□□ -2.24
SSR1P43307 AL163540.1-201ENST00000485382 386 ntBASIC1.08□□□□□ -2.24
SSR1P43307 RNA5SP458-201ENST00000516188 119 ntBASIC1.08□□□□□ -2.24
SSR1P43307 RNU6-1146P-201ENST00000516282 102 ntBASIC1.08□□□□□ -2.24
SSR1P43307 SNORA25.14-201ENST00000516481 132 ntBASIC1.08□□□□□ -2.24
SSR1P43307 RNU6-922P-201ENST00000516753 99 ntBASIC1.08□□□□□ -2.24
SSR1P43307 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.08□□□□□ -2.24
SSR1P43307 MIR8054-201ENST00000620877 86 ntBASIC1.08□□□□□ -2.24
SSR1P43307 AC099654.12-201ENST00000639868 649 ntBASIC1.08□□□□□ -2.24
SSR1P43307 RNU6-873P-201ENST00000363833 107 ntBASIC1.07□□□□□ -2.24
SSR1P43307 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
SSR1P43307 RNU6-1240P-201ENST00000365155 104 ntBASIC1.07□□□□□ -2.24
SSR1P43307 RNU6-483P-201ENST00000384088 108 ntBASIC1.07□□□□□ -2.24
SSR1P43307 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.07□□□□□ -2.24
SSR1P43307 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.07□□□□□ -2.24
SSR1P43307 MTCO1P20-201ENST00000425366 358 ntBASIC1.07□□□□□ -2.24
SSR1P43307 ERLEC1P1-201ENST00000433806 578 ntBASIC1.07□□□□□ -2.24
SSR1P43307 RNU6-221P-201ENST00000459541 99 ntBASIC1.07□□□□□ -2.24
SSR1P43307 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.07□□□□□ -2.24
SSR1P43307 RPL30P10-201ENST00000488148 337 ntBASIC1.07□□□□□ -2.24
SSR1P43307 RNU6-405P-201ENST00000516637 110 ntBASIC1.07□□□□□ -2.24
SSR1P43307 RNU1-142P-201ENST00000516682 145 ntBASIC1.07□□□□□ -2.24
SSR1P43307 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.07□□□□□ -2.24
SSR1P43307 MIR4778-201ENST00000577635 80 ntBASIC1.07□□□□□ -2.24
SSR1P43307 AC100830.2-201ENST00000581636 240 ntBASIC1.07□□□□□ -2.24
SSR1P43307 AL390123.1-201ENST00000603216 237 ntBASIC1.07□□□□□ -2.24
SSR1P43307 AC092954.2-201ENST00000609103 430 ntBASIC1.07□□□□□ -2.24
SSR1P43307 AC006504.8-201ENST00000621046 635 ntBASIC1.07□□□□□ -2.24
SSR1P43307 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.07□□□□□ -2.24
SSR1P43307 AC124864.2-201ENST00000624736 186 ntBASIC1.07□□□□□ -2.24
SSR1P43307 AC008873.1-201ENST00000625051 138 ntBASIC1.07□□□□□ -2.24
SSR1P43307 MTND4P12-201ENST00000498999 1377 ntBASIC1.07□□□□□ -2.24
SSR1P43307 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.06□□□□□ -2.24
SSR1P43307 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
SSR1P43307 RNU6-306P-201ENST00000384617 107 ntBASIC1.06□□□□□ -2.24
SSR1P43307 RNU6-440P-201ENST00000390882 105 ntBASIC1.06□□□□□ -2.24
SSR1P43307 AC245047.3-201ENST00000429428 127 ntBASIC1.06□□□□□ -2.24
SSR1P43307 AL353572.1-201ENST00000442490 417 ntBASIC1.06□□□□□ -2.24
SSR1P43307 HSPE1P13-201ENST00000451143 297 ntBASIC1.06□□□□□ -2.24
SSR1P43307 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.06□□□□□ -2.24
SSR1P43307 Y_RNA.693-201ENST00000516641 110 ntBASIC1.06□□□□□ -2.24
SSR1P43307 RNU6-58P-201ENST00000517143 103 ntBASIC1.06□□□□□ -2.24
SSR1P43307 MIR4769-201ENST00000584126 77 ntBASIC1.06□□□□□ -2.24
SSR1P43307 AC080078.3-201ENST00000605407 463 ntBASIC1.06□□□□□ -2.24
SSR1P43307 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.06□□□□□ -2.24
SSR1P43307 AC121333.1-201ENST00000567488 2709 ntBASIC1.05□□□□□ -2.24
SSR1P43307 Y_RNA.38-201ENST00000362617 102 ntBASIC1.05□□□□□ -2.24
SSR1P43307 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
SSR1P43307 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.05□□□□□ -2.24
SSR1P43307 MTCO3P18-201ENST00000440206 761 ntBASIC1.05□□□□□ -2.24
SSR1P43307 MTCO2P30-201ENST00000503662 364 ntBASIC1.05□□□□□ -2.24
SSR1P43307 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.05□□□□□ -2.24
SSR1P43307 AC091885.1-201ENST00000506658 268 ntBASIC1.05□□□□□ -2.24
SSR1P43307 RNU6-344P-201ENST00000516635 111 ntBASIC1.05□□□□□ -2.24
SSR1P43307 RNU6-273P-201ENST00000516937 96 ntBASIC1.05□□□□□ -2.24
SSR1P43307 AC027288.2-201ENST00000553028 243 ntBASIC1.05□□□□□ -2.24
SSR1P43307 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.05□□□□□ -2.24
SSR1P43307 AL022345.2-201ENST00000606307 135 ntBASIC1.05□□□□□ -2.24
SSR1P43307 BX284668.6-201ENST00000606899 438 ntBASIC1.05□□□□□ -2.24
SSR1P43307 SNORD11B-201ENST00000607707 90 ntBASIC1.05□□□□□ -2.24
SSR1P43307 AL359075.3-201ENST00000613288 217 ntBASIC1.05□□□□□ -2.24
SSR1P43307 AL359880.1-201ENST00000621879 266 ntBASIC1.05□□□□□ -2.24
SSR1P43307 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.05□□□□□ -2.24
SSR1P43307 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SSR1P43307 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
SSR1P43307 Y_RNA.51-201ENST00000362725 102 ntBASIC1.04□□□□□ -2.24
SSR1P43307 Y_RNA.319-201ENST00000365138 92 ntBASIC1.04□□□□□ -2.24
SSR1P43307 MIR517A-201ENST00000385001 87 ntBASIC1.04□□□□□ -2.24
SSR1P43307 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.04□□□□□ -2.24
SSR1P43307 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.04□□□□□ -2.24
SSR1P43307 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.04□□□□□ -2.24
SSR1P43307 AC074290.1-201ENST00000448883 135 ntBASIC1.04□□□□□ -2.24
SSR1P43307 PCMTD1P1-201ENST00000455560 355 ntBASIC1.04□□□□□ -2.24
SSR1P43307 AC091179.3-201ENST00000474761 144 ntBASIC1.04□□□□□ -2.24
SSR1P43307 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.04□□□□□ -2.24
SSR1P43307 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
SSR1P43307 Y_RNA.688-201ENST00000516565 95 ntBASIC1.04□□□□□ -2.24
SSR1P43307 AC023157.2-201ENST00000540596 141 ntBASIC1.04□□□□□ -2.24
SSR1P43307 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.04□□□□□ -2.24
SSR1P43307 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
SSR1P43307 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.04□□□□□ -2.24
SSR1P43307 AC009248.2-201ENST00000619826 254 ntBASIC1.04□□□□□ -2.24
SSR1P43307 RNU6-1123P-201ENST00000362347 106 ntBASIC1.03□□□□□ -2.24
SSR1P43307 Y_RNA.100-201ENST00000363141 102 ntBASIC1.03□□□□□ -2.24
SSR1P43307 SNORD116-9-201ENST00000384000 95 ntBASIC1.03□□□□□ -2.24
SSR1P43307 SNORD116-3-201ENST00000384287 95 ntBASIC1.03□□□□□ -2.24
SSR1P43307 SNORA25-201ENST00000384384 134 ntBASIC1.03□□□□□ -2.24
SSR1P43307 SNORD116-7-201ENST00000384404 95 ntBASIC1.03□□□□□ -2.24
SSR1P43307 RNU6-505P-201ENST00000384427 107 ntBASIC1.03□□□□□ -2.24
SSR1P43307 SNORD116-5-201ENST00000384462 95 ntBASIC1.03□□□□□ -2.24
SSR1P43307 POLR2J4-204ENST00000418424 324 ntBASIC1.03□□□□□ -2.24
SSR1P43307 COX6CP14-201ENST00000469580 174 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 502.5 ms