Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RPL31P35-201ENST00000431058 377 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 AC004854.1-201ENST00000440356 349 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 UBE2D3P4-201ENST00000441973 436 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC0.17□□□□□ -2.38
CASQ1P31415 RNU7-167P-201ENST00000459160 62 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.17□□□□□ -2.38
CASQ1P31415 RNU6-1116P-201ENST00000517269 99 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.17□□□□□ -2.38
CASQ1P31415 7SK.7-201ENST00000603504 247 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 AL008636.1-201ENST00000625038 1018 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 AC010608.3-201ENST00000625048 527 ntBASIC0.17□□□□□ -2.38
CASQ1P31415 MIR103A1-201ENST00000362165 78 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 SNORA25.3-201ENST00000363205 127 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 RNU6-282P-201ENST00000365357 103 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.16□□□□□ -2.38
CASQ1P31415 AC079781.2-201ENST00000446424 169 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 AC105417.1-201ENST00000514691 285 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 RNU6-344P-201ENST00000516635 111 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 AC036111.3-201ENST00000526389 112 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CASQ1P31415 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.16□□□□□ -2.38
CASQ1P31415 MIR5000-201ENST00000577717 103 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 MIR4431-201ENST00000579990 94 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 MIR3941-201ENST00000582572 103 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 AC007014.2-201ENST00000615581 479 ntBASIC0.16□□□□□ -2.38
CASQ1P31415 ZNF204P-201ENST00000416749 2397 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 Y_RNA.265-201ENST00000364677 108 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 MIR140-201ENST00000385282 100 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 MIR1185-2-201ENST00000408687 86 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 CCDC34P1-201ENST00000507441 517 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 RNU7-12P-201ENST00000516030 62 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 RN7SKP164-201ENST00000516138 266 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 RNU6-496P-201ENST00000516145 99 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 RNU6-430P-201ENST00000517078 107 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.15□□□□□ -2.39
CASQ1P31415 Z84480.1-201ENST00000605131 311 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 AC007684.1-201ENST00000609671 477 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 uc_338.11-201ENST00000619132 160 ntBASIC0.15□□□□□ -2.39
CASQ1P31415 Y_RNA.123-201ENST00000363338 102 ntBASIC0.14□□□□□ -2.39
CASQ1P31415 RNU6-1297P-201ENST00000384415 104 ntBASIC0.14□□□□□ -2.39
CASQ1P31415 Y_RNA.598-201ENST00000410480 95 ntBASIC0.14□□□□□ -2.39
CASQ1P31415 RNU6-177P-201ENST00000411257 104 ntBASIC0.14□□□□□ -2.39
CASQ1P31415 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.14□□□□□ -2.39
CASQ1P31415 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.14□□□□□ -2.39
CASQ1P31415 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.14□□□□□ -2.39
CASQ1P31415 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.14□□□□□ -2.39
CASQ1P31415 MIR6788-201ENST00000618842 66 ntBASIC0.14□□□□□ -2.39
CASQ1P31415 MIR6079-201ENST00000635807 62 ntBASIC0.14□□□□□ -2.39
CASQ1P31415 OR5AK4P-201ENST00000635912 903 ntBASIC0.14□□□□□ -2.39
CASQ1P31415 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 RNU6-369P-201ENST00000362515 102 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 SNORA1B-201ENST00000362535 133 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 RNU6-1317P-201ENST00000364582 104 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 SNORD114-22-201ENST00000365423 72 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.13□□□□□ -2.39
CASQ1P31415 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.13□□□□□ -2.39
CASQ1P31415 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.13□□□□□ -2.39
CASQ1P31415 RNU7-41P-201ENST00000515917 61 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 AC023157.2-201ENST00000540596 141 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.13□□□□□ -2.39
CASQ1P31415 AC091178.2-201ENST00000584401 117 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 MTND4P4-201ENST00000439033 1366 ntBASIC0.13□□□□□ -2.39
CASQ1P31415 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
CASQ1P31415 MIR103A2-201ENST00000362154 78 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 RNU6-1097P-201ENST00000363586 107 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 Y_RNA.191-201ENST00000363972 113 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 RNU6-903P-201ENST00000391270 109 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 AL593851.1-201ENST00000426171 157 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.12□□□□□ -2.39
CASQ1P31415 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.12□□□□□ -2.39
CASQ1P31415 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.12□□□□□ -2.39
CASQ1P31415 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.12□□□□□ -2.39
CASQ1P31415 SNORD65B-201ENST00000459126 73 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 AC091133.4-201ENST00000511142 308 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.12□□□□□ -2.39
CASQ1P31415 MRPS36P3-201ENST00000519284 130 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 FGF7P1-201ENST00000582820 288 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 MIR151B-201ENST00000584249 96 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 MIR4438-201ENST00000585271 93 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.12□□□□□ -2.39
CASQ1P31415 MIR6513-201ENST00000621188 64 ntBASIC0.12□□□□□ -2.39
CASQ1P31415 RNU6-1266P-201ENST00000362794 105 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 Y_RNA.336-201ENST00000365307 109 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 RNU6-297P-201ENST00000384636 107 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.11□□□□□ -2.39
CASQ1P31415 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 MIR1827-201ENST00000408549 66 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 MIR548J-201ENST00000408833 112 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 MIR1302-7-201ENST00000408841 72 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 Z98949.2-201ENST00000440996 144 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.11□□□□□ -2.39
CASQ1P31415 MRPS10P1-201ENST00000448483 130 ntBASIC0.11□□□□□ -2.39
CASQ1P31415 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.11□□□□□ -2.39
CASQ1P31415 AC091021.1-201ENST00000468051 388 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms