Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RPL23AP42-201ENST00000471152 471 ntBASIC2.18□□□□□ -2.06
HOXA13P31271 RPL23AP63-201ENST00000498752 471 ntBASIC2.18□□□□□ -2.06
HOXA13P31271 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXA13P31271 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.18□□□□□ -2.06
HOXA13P31271 RPL17P51-201ENST00000605218 238 ntBASIC2.18□□□□□ -2.06
HOXA13P31271 AC083806.3-201ENST00000614016 455 ntBASIC2.18□□□□□ -2.06
HOXA13P31271 AC130454.1-201ENST00000622948 401 ntBASIC2.18□□□□□ -2.06
HOXA13P31271 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXA13P31271 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXA13P31271 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXA13P31271 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HOXA13P31271 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXA13P31271 Y_RNA.106-201ENST00000363189 100 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 Y_RNA.162-201ENST00000363683 102 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 Y_RNA.202-201ENST00000364083 110 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 RNU6-738P-201ENST00000384531 106 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 MIR29C-201ENST00000385231 88 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 SNORA40.19-201ENST00000390846 128 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 RPS26P42-201ENST00000413485 326 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXA13P31271 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA13P31271 RN7SKP210-201ENST00000459176 261 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 ATP5EP1-201ENST00000510257 156 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXA13P31271 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA13P31271 AC026470.2-201ENST00000561492 181 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 UBL5P4-201ENST00000562584 236 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 AC007229.1-201ENST00000590455 412 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 AC104695.3-201ENST00000604052 296 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 RMST_6.1-201ENST00000611980 203 ntBASIC2.17□□□□□ -2.06
HOXA13P31271 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA13P31271 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA13P31271 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA13P31271 Y_RNA.319-201ENST00000365138 92 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 RNU6-1160P-201ENST00000384546 104 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 MIR144-201ENST00000384886 86 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 HMGN2P39-201ENST00000398005 273 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 MRPL42P3-201ENST00000401492 326 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 AL355497.1-201ENST00000406262 551 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXA13P31271 IPO7P1-201ENST00000442031 636 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 MTCO3P8-201ENST00000453691 755 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 HMGN2P23-201ENST00000456759 269 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 AC108210.2-201ENST00000503681 201 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 RNU6-1198P-201ENST00000516904 67 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 Y_RNA.706-201ENST00000516933 99 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 RNU6-988P-201ENST00000519081 107 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXA13P31271 AC027288.2-201ENST00000553028 243 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 AC078899.2-201ENST00000595282 212 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXA13P31271 TCL6_2.1-201ENST00000615162 119 ntBASIC2.16□□□□□ -2.06
HOXA13P31271 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HOXA13P31271 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.15□□□□□ -2.06
HOXA13P31271 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
HOXA13P31271 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXA13P31271 RNU6-545P-201ENST00000362681 104 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 Y_RNA.99-201ENST00000363138 105 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 RNA5SP99-201ENST00000364020 114 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 Y_RNA.358-201ENST00000365491 99 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 MIR518A2-201ENST00000384966 87 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 RNU6-700P-201ENST00000391043 107 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 snosnR66.1-201ENST00000391095 99 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 RNU11-3P-201ENST00000391111 133 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 MIR190B-201ENST00000401119 79 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 WARS2P1-201ENST00000429678 537 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXA13P31271 RNU7-87P-201ENST00000459343 62 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 MTATP8P1-201ENST00000467115 207 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 AP000870.1-201ENST00000472927 406 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 RNU6-327P-201ENST00000516270 127 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 RNA5SP54-201ENST00000516951 92 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 AC104581.2-201ENST00000572227 430 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 AC006600.1-201ENST00000572529 153 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXA13P31271 MIR5188-201ENST00000583467 113 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 MIR4769-201ENST00000584126 77 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 MIR6840-201ENST00000611937 71 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 AL606534.2-204ENST00000635008 178 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.15□□□□□ -2.07
HOXA13P31271 SNORD115-32-201ENST00000364079 82 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 RNU1-115P-201ENST00000365329 160 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 RNU6-17P-201ENST00000384245 107 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 RNU6-18P-201ENST00000384527 107 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 RNU6-160P-201ENST00000384591 107 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 SNORA26.9-201ENST00000391322 122 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 Y_RNA.592-201ENST00000410274 109 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 BX510359.4-201ENST00000423750 193 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 MTCYBP10-201ENST00000424905 650 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 AC099799.1-201ENST00000439809 192 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXA13P31271 AC112492.4-201ENST00000456549 352 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 RPS29P11-201ENST00000496507 171 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms