Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 snoU2_19.1-201ENST00000362361 80 ntBASIC1.9□□□□□ -2.11
SHC1P29353 Y_RNA.19-201ENST00000362462 99 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNU1-76P-201ENST00000362903 159 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNU6-137P-201ENST00000363680 108 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNA5SP125-201ENST00000364843 120 ntBASIC1.9□□□□□ -2.11
SHC1P29353 Y_RNA.396-201ENST00000383949 103 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNU6-926P-201ENST00000384075 107 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNU6-611P-201ENST00000384276 104 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNU6-472P-201ENST00000384299 107 ntBASIC1.9□□□□□ -2.11
SHC1P29353 Y_RNA.526-201ENST00000384572 110 ntBASIC1.9□□□□□ -2.11
SHC1P29353 MIR329-1-201ENST00000385028 80 ntBASIC1.9□□□□□ -2.11
SHC1P29353 MT-TW-201ENST00000387382 68 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNA5SP201-201ENST00000410316 124 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNU2-20P-201ENST00000410425 191 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RN7SKP192-201ENST00000411291 327 ntBASIC1.9□□□□□ -2.11
SHC1P29353 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.9□□□□□ -2.11
SHC1P29353 AC003685.2-201ENST00000422795 395 ntBASIC1.9□□□□□ -2.11
SHC1P29353 EIF4EP4-201ENST00000424916 578 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AC010095.1-201ENST00000443543 144 ntBASIC1.9□□□□□ -2.11
SHC1P29353 IFNA11P-201ENST00000446352 526 ntBASIC1.9□□□□□ -2.11
SHC1P29353 LINC01399-202ENST00000458450 244 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AC007215.1-201ENST00000464893 276 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AC067942.3-201ENST00000512025 362 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.9□□□□□ -2.11
SHC1P29353 AL161670.1-201ENST00000554348 137 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AC009127.3-201ENST00000570531 403 ntBASIC1.9□□□□□ -2.11
SHC1P29353 MIR5695-201ENST00000579717 85 ntBASIC1.9□□□□□ -2.11
SHC1P29353 MIR4659A-201ENST00000580269 81 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AC073410.2-201ENST00000603240 332 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AL034555.1-201ENST00000604816 211 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AL121655.1-201ENST00000605811 308 ntBASIC1.9□□□□□ -2.11
SHC1P29353 SNORD14A-201ENST00000606526 91 ntBASIC1.9□□□□□ -2.11
SHC1P29353 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.9□□□□□ -2.11
SHC1P29353 PCGEM1.1-201ENST00000613431 131 ntBASIC1.9□□□□□ -2.11
SHC1P29353 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.9□□□□□ -2.11
SHC1P29353 AC137590.2-201ENST00000619709 240 ntBASIC1.9□□□□□ -2.11
SHC1P29353 MIR8062-201ENST00000621515 85 ntBASIC1.9□□□□□ -2.11
SHC1P29353 RNU6-655P-201ENST00000362858 107 ntBASIC1.89□□□□□ -2.11
SHC1P29353 RNU6-1210P-201ENST00000363775 107 ntBASIC1.89□□□□□ -2.11
SHC1P29353 RNU6-873P-201ENST00000363833 107 ntBASIC1.89□□□□□ -2.11
SHC1P29353 Y_RNA.276-201ENST00000364732 109 ntBASIC1.89□□□□□ -2.11
SHC1P29353 RNU6-1145P-201ENST00000384246 107 ntBASIC1.89□□□□□ -2.11
SHC1P29353 MIR215-201ENST00000384858 110 ntBASIC1.89□□□□□ -2.11
SHC1P29353 SNORA48.3-201ENST00000391081 134 ntBASIC1.89□□□□□ -2.11
SHC1P29353 MIR208B-201ENST00000401172 77 ntBASIC1.89□□□□□ -2.11
SHC1P29353 AL079342.1-201ENST00000401460 267 ntBASIC1.89□□□□□ -2.11
SHC1P29353 RN7SKP284-201ENST00000411002 343 ntBASIC1.89□□□□□ -2.11
SHC1P29353 RNU6-1001P-201ENST00000411265 100 ntBASIC1.89□□□□□ -2.11
SHC1P29353 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
SHC1P29353 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.89□□□□□ -2.11
SHC1P29353 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.89□□□□□ -2.11
SHC1P29353 AL731563.1-201ENST00000442202 214 ntBASIC1.89□□□□□ -2.11
SHC1P29353 PCNPP5-201ENST00000452246 481 ntBASIC1.89□□□□□ -2.11
SHC1P29353 AC090515.1-201ENST00000465295 476 ntBASIC1.89□□□□□ -2.11
SHC1P29353 RPS29P21-201ENST00000496272 170 ntBASIC1.89□□□□□ -2.11
SHC1P29353 AC091144.1-201ENST00000519573 138 ntBASIC1.89□□□□□ -2.11
SHC1P29353 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.89□□□□□ -2.11
SHC1P29353 AC136932.1-201ENST00000574771 208 ntBASIC1.89□□□□□ -2.11
SHC1P29353 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.89□□□□□ -2.11
SHC1P29353 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.89□□□□□ -2.11
SHC1P29353 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.89□□□□□ -2.11
SHC1P29353 AL357075.2-201ENST00000614906 189 ntBASIC1.89□□□□□ -2.11
SHC1P29353 AC010205.1-201ENST00000616668 449 ntBASIC1.89□□□□□ -2.11
SHC1P29353 ZNF204P-201ENST00000416749 2397 ntBASIC1.89□□□□□ -2.11
SHC1P29353 RNU1-72P-201ENST00000362976 153 ntBASIC1.88□□□□□ -2.11
SHC1P29353 Y_RNA.143-201ENST00000363520 106 ntBASIC1.88□□□□□ -2.11
SHC1P29353 Y_RNA.183-201ENST00000363882 113 ntBASIC1.88□□□□□ -2.11
SHC1P29353 Y_RNA.376-201ENST00000365638 108 ntBASIC1.88□□□□□ -2.11
SHC1P29353 RPL21P38-201ENST00000418090 167 ntBASIC1.88□□□□□ -2.11
SHC1P29353 SDAD1P3-201ENST00000427380 333 ntBASIC1.88□□□□□ -2.11
SHC1P29353 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.88□□□□□ -2.11
SHC1P29353 AC145146.1-201ENST00000496370 254 ntBASIC1.88□□□□□ -2.11
SHC1P29353 RNU6-567P-201ENST00000516746 107 ntBASIC1.88□□□□□ -2.11
SHC1P29353 RNU6-1198P-201ENST00000516904 67 ntBASIC1.88□□□□□ -2.11
SHC1P29353 RNA5SP54-201ENST00000516951 92 ntBASIC1.88□□□□□ -2.11
SHC1P29353 AC093023.1-201ENST00000547375 507 ntBASIC1.88□□□□□ -2.11
SHC1P29353 AC004817.2-201ENST00000561794 651 ntBASIC1.88□□□□□ -2.11
SHC1P29353 MIR3671-201ENST00000580455 88 ntBASIC1.88□□□□□ -2.11
SHC1P29353 AC002984.1-201ENST00000591692 448 ntBASIC1.88□□□□□ -2.11
SHC1P29353 RPL30P11-203ENST00000598995 310 ntBASIC1.88□□□□□ -2.11
SHC1P29353 AL138963.2-201ENST00000605137 226 ntBASIC1.88□□□□□ -2.11
SHC1P29353 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.88□□□□□ -2.11
SHC1P29353 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SHC1P29353 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.88□□□□□ -2.11
SHC1P29353 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.87□□□□□ -2.11
SHC1P29353 OR56A5-201ENST00000340110 738 ntBASIC1.87□□□□□ -2.11
SHC1P29353 RNU6-961P-201ENST00000363893 105 ntBASIC1.87□□□□□ -2.11
SHC1P29353 SNORA3A-201ENST00000364113 130 ntBASIC1.87□□□□□ -2.11
SHC1P29353 Y_RNA.483-201ENST00000384380 101 ntBASIC1.87□□□□□ -2.11
SHC1P29353 SNORA12-201ENST00000391162 147 ntBASIC1.87□□□□□ -2.11
SHC1P29353 MIR1302-3-201ENST00000408128 138 ntBASIC1.87□□□□□ -2.11
SHC1P29353 SNORD12B-201ENST00000410433 91 ntBASIC1.87□□□□□ -2.11
SHC1P29353 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.87□□□□□ -2.11
SHC1P29353 Y_RNA.668-201ENST00000516233 93 ntBASIC1.87□□□□□ -2.11
SHC1P29353 SNORA25.14-201ENST00000516481 132 ntBASIC1.87□□□□□ -2.11
SHC1P29353 RN7SKP49-201ENST00000516675 260 ntBASIC1.87□□□□□ -2.11
SHC1P29353 SNORA40.15-201ENST00000516884 107 ntBASIC1.87□□□□□ -2.11
SHC1P29353 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.87□□□□□ -2.11
SHC1P29353 DEFB131C-201ENST00000528817 165 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms