Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.41□□□□□ -2.18
PTPN6P29350 RPL30P10-201ENST00000488148 337 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.41□□□□□ -2.18
PTPN6P29350 RNU1-54P-201ENST00000517181 120 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 AC027288.2-201ENST00000553028 243 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.41□□□□□ -2.18
PTPN6P29350 AL512598.1-201ENST00000610158 273 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 AL121890.5-201ENST00000620848 304 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 MIR3688-2-201ENST00000636963 87 ntBASIC1.41□□□□□ -2.18
PTPN6P29350 RNU1-62P-201ENST00000362599 164 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNU6-137P-201ENST00000363680 108 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNU6-873P-201ENST00000363833 107 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNU6-271P-201ENST00000363858 105 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNU6-60P-201ENST00000364792 103 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PTPN6P29350 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNA5SP247-201ENST00000411181 105 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 COX6CP10-201ENST00000416832 224 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.4□□□□□ -2.19
PTPN6P29350 snoU13.27-201ENST00000459278 104 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RPS26P55-201ENST00000471178 356 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 AC092989.1-201ENST00000481235 277 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNU7-175P-201ENST00000515915 61 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNU6-566P-201ENST00000516790 107 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNU6-1088P-201ENST00000516850 104 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 RNA5SP454-201ENST00000517231 127 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 SUB1P3-201ENST00000564581 315 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.4□□□□□ -2.19
PTPN6P29350 MIR5696-201ENST00000578474 85 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.4□□□□□ -2.19
PTPN6P29350 MIR4781-201ENST00000585250 76 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
PTPN6P29350 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
PTPN6P29350 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PTPN6P29350 MIR337-201ENST00000362281 93 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 SNORA33-201ENST00000363664 130 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 RNU5F-3P-201ENST00000363767 117 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 RNU4-13P-201ENST00000364019 141 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 RNU1-42P-201ENST00000364033 160 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 RNU6-280P-201ENST00000364145 104 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 Y_RNA.287-201ENST00000364853 94 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 RNU6-1240P-201ENST00000365155 104 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 RNU6-17P-201ENST00000384245 107 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 RNU6-18P-201ENST00000384527 107 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 Y_RNA.533-201ENST00000384596 114 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 RNA5SP504-201ENST00000410676 117 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 AL139396.1-201ENST00000421137 167 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.39□□□□□ -2.19
PTPN6P29350 AC090517.2-201ENST00000614966 680 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 MIR6128-201ENST00000615528 109 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 AC009248.2-201ENST00000619826 254 ntBASIC1.39□□□□□ -2.19
PTPN6P29350 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PTPN6P29350 MTND4P12-201ENST00000498999 1377 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 RNU6-727P-201ENST00000363592 107 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 SNORD87-201ENST00000364849 89 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 RNU6-596P-201ENST00000365395 98 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 RNU6-331P-201ENST00000384724 107 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 SNORA67.6-201ENST00000391093 99 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 RNA5SP467-201ENST00000391274 118 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 RNU6-1148P-201ENST00000410992 104 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AC243428.1-201ENST00000421099 264 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 MTND1P34-201ENST00000438556 671 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.38□□□□□ -2.19
PTPN6P29350 AC092473.1-201ENST00000441098 221 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 RNU6-221P-201ENST00000459541 99 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AC099513.1-201ENST00000490423 301 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AC079140.2-201ENST00000506193 142 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AC103851.1-201ENST00000506833 274 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AC025647.1-201ENST00000517879 253 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AC134698.4-201ENST00000523451 826 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AL590705.4-201ENST00000532209 134 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 UBL5P4-201ENST00000562584 236 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AL359821.1-201ENST00000605519 182 ntBASIC1.38□□□□□ -2.19
PTPN6P29350 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.38□□□□□ -2.19
PTPN6P29350 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
PTPN6P29350 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
PTPN6P29350 U3.8-201ENST00000363675 217 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 RNU6-159P-201ENST00000391080 106 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 MIR548F1-201ENST00000408667 84 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 RNU6-174P-201ENST00000410406 106 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 RNU6-321P-201ENST00000410912 106 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 AC016909.1-201ENST00000415916 166 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 RPS29P25-201ENST00000481709 171 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 AC023790.1-201ENST00000482174 347 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 RNU6-718P-201ENST00000516166 105 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 SNORA31.24-201ENST00000517232 57 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 AC024995.1-201ENST00000523014 93 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 AC015720.1-201ENST00000565251 277 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 MIR4709-201ENST00000577272 72 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 MIR4790-201ENST00000577799 79 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 AC095038.3-201ENST00000634439 195 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 ZNF299P-201ENST00000406845 1804 ntBASIC1.37□□□□□ -2.19
PTPN6P29350 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
PTPN6P29350 Y_RNA.6-201ENST00000362350 114 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 RNY1P10-201ENST00000363268 113 ntBASIC1.36□□□□□ -2.19
PTPN6P29350 RNU6-1059P-201ENST00000363752 98 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms