Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AIG1P1-201ENST00000503376 148 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 RNU6-58P-201ENST00000517143 103 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.8□□□□□ -1.96
POLR2AP24928 MIR3133-201ENST00000583157 78 ntBASIC2.8□□□□□ -1.96
POLR2AP24928 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.8□□□□□ -1.96
POLR2AP24928 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
POLR2AP24928 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
POLR2AP24928 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.79□□□□□ -1.96
POLR2AP24928 AC135776.4-201ENST00000624300 1904 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
POLR2AP24928 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
POLR2AP24928 RNU6-487P-201ENST00000365430 104 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 SNORA64-201ENST00000384674 134 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 U8.13-201ENST00000390842 128 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 RNA5SP475-201ENST00000410568 110 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 PTGES3P4-201ENST00000426243 356 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.79□□□□□ -1.96
POLR2AP24928 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.79□□□□□ -1.96
POLR2AP24928 RPL30P5-201ENST00000494923 336 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.79□□□□□ -1.96
POLR2AP24928 RNY3P16-201ENST00000516338 101 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 SNORA31.23-201ENST00000517219 133 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 HSPE1P4-201ENST00000550617 308 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 SNORD98-201ENST00000636377 67 ntBASIC2.79□□□□□ -1.96
POLR2AP24928 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.78□□□□□ -1.96
POLR2AP24928 Y_RNA.4-201ENST00000362333 112 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 RNU6-727P-201ENST00000363592 107 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 Y_RNA.272-201ENST00000364696 102 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 Y_RNA.304-201ENST00000365011 112 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 SNORA80E-201ENST00000384744 137 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 SNORD116-28-201ENST00000516123 91 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.78□□□□□ -1.96
POLR2AP24928 AC055872.1-201ENST00000570978 278 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 AC010999.1-201ENST00000611856 324 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR2AP24928 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
POLR2AP24928 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
POLR2AP24928 AC002546.1-201ENST00000588041 2504 ntBASIC2.78□□□□□ -1.96
POLR2AP24928 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
POLR2AP24928 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
POLR2AP24928 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR2AP24928 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.78□□□□□ -1.96
POLR2AP24928 Y_RNA.75-201ENST00000362927 97 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 Y_RNA.597-201ENST00000410463 100 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 RNU6-1199P-201ENST00000411249 104 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 CR769767.1-201ENST00000436337 346 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 HSPE1P13-201ENST00000451143 297 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 RPS27P29-201ENST00000463110 252 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 RPS27AP9-201ENST00000477681 438 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 AC091874.1-201ENST00000511402 339 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 AC093331.1-201ENST00000521474 169 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 RPL21P9-201ENST00000556149 474 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.78□□□□□ -1.97
POLR2AP24928 MIR3145-201ENST00000580727 82 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 AC006001.4-201ENST00000622243 395 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.78□□□□□ -1.97
POLR2AP24928 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR2AP24928 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR2AP24928 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR2AP24928 RNU6-326P-201ENST00000365480 107 ntBASIC2.77□□□□□ -1.97
POLR2AP24928 RNU6-394P-201ENST00000410735 107 ntBASIC2.77□□□□□ -1.97
POLR2AP24928 AL714022.1-201ENST00000439897 151 ntBASIC2.77□□□□□ -1.97
POLR2AP24928 TMSB4XP3-201ENST00000445144 114 ntBASIC2.77□□□□□ -1.97
POLR2AP24928 snoU13.14-201ENST00000459372 104 ntBASIC2.77□□□□□ -1.97
POLR2AP24928 AP000870.1-201ENST00000472927 406 ntBASIC2.77□□□□□ -1.97
POLR2AP24928 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.77□□□□□ -1.97
POLR2AP24928 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.77□□□□□ -1.97
POLR2AP24928 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.77□□□□□ -1.97
POLR2AP24928 MIR3923-201ENST00000579521 83 ntBASIC2.77□□□□□ -1.97
POLR2AP24928 AC068831.7-201ENST00000616954 363 ntBASIC2.77□□□□□ -1.97
POLR2AP24928 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR2AP24928 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
POLR2AP24928 SNORA25.1-201ENST00000362326 128 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 RNU4-84P-201ENST00000364200 139 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 Y_RNA.217-201ENST00000364214 105 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 Y_RNA.226-201ENST00000364337 114 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 Y_RNA.361-201ENST00000365515 120 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 Y_RNA.412-201ENST00000384001 104 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 RNU6-19P-201ENST00000384718 107 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR2AP24928 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.76□□□□□ -1.97
POLR2AP24928 Y_RNA.641-201ENST00000459414 105 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 AC140059.1-201ENST00000489238 361 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
POLR2AP24928 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.76□□□□□ -1.97
POLR2AP24928 MIR4431-201ENST00000579990 94 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 MIR5006-201ENST00000583027 110 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 AC069294.1-201ENST00000608397 350 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR2AP24928 uc_338.14-201ENST00000613162 166 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 MIR6845-201ENST00000613182 61 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.76□□□□□ -1.97
POLR2AP24928 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
POLR2AP24928 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
POLR2AP24928 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
POLR2AP24928 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
POLR2AP24928 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
POLR2AP24928 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms