Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 ZNF299P-201ENST00000406845 1804 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 RNA5SP240-201ENST00000365355 128 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 RNU6-487P-201ENST00000365430 104 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 RNU6-1286P-201ENST00000383871 107 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 RNU6-1040P-201ENST00000383974 107 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 RNU6-1227P-201ENST00000383981 107 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 Y_RNA.428-201ENST00000384078 102 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
COL5A1P20908 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
COL5A1P20908 RN7SKP158-201ENST00000410453 326 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.18□□□□□ -2.22
COL5A1P20908 AC244670.1-201ENST00000436879 112 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 AC079354.2-201ENST00000453523 154 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 RPL23AP75-201ENST00000491601 451 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 AF186996.7-201ENST00000492781 209 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 AC116655.1-201ENST00000508324 901 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 RNU2-44P-201ENST00000516795 194 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 RNU2-19P-201ENST00000517288 84 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 AL590705.4-201ENST00000532209 134 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 AC016256.1-201ENST00000547971 354 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 MIR4287-201ENST00000579398 78 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 SNORD58B-201ENST00000607313 66 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 AC022140.2-201ENST00000623500 188 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.18□□□□□ -2.22
COL5A1P20908 AC009541.1-201ENST00000438279 2662 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.18□□□□□ -2.22
COL5A1P20908 AL161722.3-201ENST00000605789 2983 ntBASIC1.18□□□□□ -2.22
COL5A1P20908 SNORD56.1-201ENST00000362913 68 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 RNY1P16-201ENST00000363063 111 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 SNORD114-19-201ENST00000363072 75 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 Y_RNA.132-201ENST00000363421 102 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 RNU6-336P-201ENST00000364891 107 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 SNORA69.1-201ENST00000390904 137 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 MIR548P-201ENST00000408336 84 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 MCFD2P1-201ENST00000417812 300 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.17□□□□□ -2.22
COL5A1P20908 AL445305.1-201ENST00000432577 575 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 snoU13.14-201ENST00000459372 104 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 RPL31P41-201ENST00000477967 372 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 SNORA25.10-201ENST00000515926 124 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 SNORA31.16-201ENST00000516773 139 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.17□□□□□ -2.22
COL5A1P20908 CBX3P8-201ENST00000532412 525 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.17□□□□□ -2.22
COL5A1P20908 MIR4273-201ENST00000582824 84 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AP001836.1-201ENST00000604675 523 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 MIR7157-201ENST00000635801 60 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AC092268.1-201ENST00000342691 405 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 Y_RNA.326-201ENST00000365176 113 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 SNORA18.2-201ENST00000383865 132 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 RNU6-1160P-201ENST00000384546 104 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 MRPL42P3-201ENST00000401492 326 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 CBX3P9-201ENST00000402326 552 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AL354751.2-201ENST00000415471 210 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AC078809.1-201ENST00000427601 140 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 OR2AQ1P-201ENST00000451972 200 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 Y_RNA.639-201ENST00000458981 102 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 RPL30P1-201ENST00000488676 339 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 MIR2355-201ENST00000517199 87 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AP005902.1-201ENST00000521358 186 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AL031274.2-201ENST00000599419 203 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AL713866.2-201ENST00000603579 219 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.17□□□□□ -2.22
COL5A1P20908 AL355802.3-201ENST00000607571 545 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AC009229.3-201ENST00000608056 282 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 AC008133.2-201ENST00000624540 351 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 MIR3529-201ENST00000637713 78 ntBASIC1.17□□□□□ -2.22
COL5A1P20908 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL5A1P20908 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COL5A1P20908 Y_RNA.80-201ENST00000362996 102 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 SNORD115-8-201ENST00000363856 82 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 SNORD115-38-201ENST00000365037 82 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 SNORA33.2-201ENST00000365413 134 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 Y_RNA.394-201ENST00000383942 103 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 RNU6-474P-201ENST00000384243 107 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 Y_RNA.463-201ENST00000384271 102 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 Y_RNA.485-201ENST00000384395 102 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 Y_RNA.645-201ENST00000391229 102 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 RNU6-101P-201ENST00000410323 104 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 RNU6-1328P-201ENST00000410938 106 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.16□□□□□ -2.22
COL5A1P20908 CYCSP48-201ENST00000417124 323 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AC099799.1-201ENST00000439809 192 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.16□□□□□ -2.22
COL5A1P20908 AC006026.2-201ENST00000457376 180 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AC107626.1-201ENST00000471084 183 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 HMGN1P13-201ENST00000505795 138 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.16□□□□□ -2.22
COL5A1P20908 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.16□□□□□ -2.22
COL5A1P20908 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
COL5A1P20908 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.16□□□□□ -2.22
COL5A1P20908 AC020661.2-201ENST00000560114 134 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AC090517.1-201ENST00000569307 266 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 AC004584.2-201ENST00000570407 410 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 MIR3136-201ENST00000583498 78 ntBASIC1.16□□□□□ -2.22
COL5A1P20908 MIR4765-201ENST00000585007 77 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms