Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNU6-159P-201ENST00000391080 106 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 RNU6-510P-201ENST00000391239 108 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 MIR1253-201ENST00000408273 105 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.38□□□□□ -2.19
XRCC1P18887 AL163540.1-201ENST00000485382 386 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.38□□□□□ -2.19
XRCC1P18887 SNORA25.14-201ENST00000516481 132 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 AC024995.1-201ENST00000523014 93 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 AC134698.4-201ENST00000523451 826 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.38□□□□□ -2.19
XRCC1P18887 AC027288.2-201ENST00000553028 243 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 SNORA59B-202ENST00000578183 701 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 MIR4422-201ENST00000581938 83 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 AL161722.3-201ENST00000605789 2983 ntBASIC1.38□□□□□ -2.19
XRCC1P18887 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.38□□□□□ -2.19
XRCC1P18887 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
XRCC1P18887 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
XRCC1P18887 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
XRCC1P18887 U3.8-201ENST00000363675 217 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 Y_RNA.301-201ENST00000364990 103 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 RNU1-78P-201ENST00000391248 165 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 RNU6-57P-201ENST00000411348 103 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 AC243428.1-201ENST00000421099 264 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.37□□□□□ -2.19
XRCC1P18887 HSPE1P24-201ENST00000450782 238 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 RNU6-221P-201ENST00000459541 99 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 RNU6-1053P-201ENST00000515930 101 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 RNU6-1088P-201ENST00000516850 104 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 AL590705.4-201ENST00000532209 134 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 SNORA77B-201ENST00000578179 125 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.37□□□□□ -2.19
XRCC1P18887 AC002553.4-201ENST00000616896 331 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 AC073869.6-201ENST00000640656 341 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 ZNF299P-201ENST00000406845 1804 ntBASIC1.37□□□□□ -2.19
XRCC1P18887 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
XRCC1P18887 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
XRCC1P18887 Y_RNA.67-201ENST00000362870 100 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 RNU6-1240P-201ENST00000365155 104 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 RNU6-306P-201ENST00000384617 107 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 RNU6-1148P-201ENST00000410992 104 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.36□□□□□ -2.19
XRCC1P18887 USMG5P1-201ENST00000425964 177 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 HMGN2P34-201ENST00000437647 269 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 AC092473.1-201ENST00000441098 221 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 RPS29P23-201ENST00000458635 123 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 AC092989.1-201ENST00000481235 277 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 RPL30P10-201ENST00000488148 337 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.36□□□□□ -2.19
XRCC1P18887 RNU6-273P-201ENST00000516937 96 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 RNU1-117P-201ENST00000517041 158 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 RNA5SP437-201ENST00000517249 129 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 AC025647.1-201ENST00000517879 253 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.36□□□□□ -2.19
XRCC1P18887 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
XRCC1P18887 AC018638.8-201ENST00000588755 281 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 AL359821.1-201ENST00000605519 182 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 AC006001.4-201ENST00000622243 395 ntBASIC1.36□□□□□ -2.19
XRCC1P18887 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.36□□□□□ -2.19
XRCC1P18887 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.35□□□□□ -2.19
XRCC1P18887 RNU6-873P-201ENST00000363833 107 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 RNU6-595P-201ENST00000363944 107 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
XRCC1P18887 MIR548F1-201ENST00000408667 84 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 RNA5SP504-201ENST00000410676 117 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.35□□□□□ -2.19
XRCC1P18887 EIF1P1-201ENST00000421436 341 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.35□□□□□ -2.19
XRCC1P18887 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.35□□□□□ -2.19
XRCC1P18887 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.35□□□□□ -2.19
XRCC1P18887 SNORD5.1-201ENST00000458800 75 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.35□□□□□ -2.19
XRCC1P18887 AC011352.1-201ENST00000512300 793 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 RNU4-49P-201ENST00000516080 140 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.35□□□□□ -2.19
XRCC1P18887 AL160236.1-201ENST00000556317 195 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.35□□□□□ -2.19
XRCC1P18887 MIR6128-201ENST00000615528 109 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 AC009248.2-201ENST00000619826 254 ntBASIC1.35□□□□□ -2.19
XRCC1P18887 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.35□□□□□ -2.19
XRCC1P18887 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
XRCC1P18887 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
XRCC1P18887 AL391987.6-201ENST00000305671 199 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 SNORD33-201ENST00000362761 85 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 RNU6-793P-201ENST00000384233 104 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.34□□□□□ -2.19
XRCC1P18887 AL356776.1-201ENST00000406574 447 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 AC004965.1-201ENST00000413033 213 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.34□□□□□ -2.19
XRCC1P18887 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.34□□□□□ -2.19
XRCC1P18887 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.34□□□□□ -2.19
XRCC1P18887 AC245517.4-201ENST00000448601 281 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 snoU13.27-201ENST00000459278 104 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 RNU6-329P-201ENST00000459618 107 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 AC005908.1-201ENST00000468701 347 ntBASIC1.34□□□□□ -2.19
XRCC1P18887 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.34□□□□□ -2.19
XRCC1P18887 RNU6-718P-201ENST00000516166 105 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms