Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RNU6-1210P-201ENST00000363775 107 ntBASIC3.68□□□□□ -1.82
LIG1P18858 RNU6-899P-201ENST00000363947 107 ntBASIC3.68□□□□□ -1.82
LIG1P18858 snoU2_19.4-201ENST00000364329 80 ntBASIC3.68□□□□□ -1.82
LIG1P18858 SNORA11.1-201ENST00000408133 129 ntBASIC3.68□□□□□ -1.82
LIG1P18858 RNU2-49P-201ENST00000410666 184 ntBASIC3.68□□□□□ -1.82
LIG1P18858 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.68□□□□□ -1.82
LIG1P18858 RN7SL75P-201ENST00000461926 281 ntBASIC3.68□□□□□ -1.82
LIG1P18858 AC145146.1-201ENST00000496370 254 ntBASIC3.68□□□□□ -1.82
LIG1P18858 AC007536.1-201ENST00000533382 349 ntBASIC3.68□□□□□ -1.82
LIG1P18858 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.68□□□□□ -1.82
LIG1P18858 MIR5688-201ENST00000580619 83 ntBASIC3.68□□□□□ -1.82
LIG1P18858 AL391813.1-201ENST00000603098 260 ntBASIC3.68□□□□□ -1.82
LIG1P18858 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.68□□□□□ -1.82
LIG1P18858 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIG1P18858 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIG1P18858 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIG1P18858 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LIG1P18858 AL049781.1-201ENST00000623195 3585 ntBASIC3.67□□□□□ -1.82
LIG1P18858 AC134026.1-201ENST00000623249 2239 ntBASIC3.67□□□□□ -1.82
LIG1P18858 U3.8-201ENST00000363675 217 ntBASIC3.67□□□□□ -1.82
LIG1P18858 SNORA18.2-201ENST00000383865 132 ntBASIC3.67□□□□□ -1.82
LIG1P18858 Y_RNA.456-201ENST00000384232 111 ntBASIC3.67□□□□□ -1.82
LIG1P18858 RNU6-376P-201ENST00000384731 106 ntBASIC3.67□□□□□ -1.82
LIG1P18858 MIR767-201ENST00000390228 109 ntBASIC3.67□□□□□ -1.82
LIG1P18858 FO393413.1-201ENST00000402892 195 ntBASIC3.67□□□□□ -1.82
LIG1P18858 Y_RNA.629-201ENST00000411368 105 ntBASIC3.67□□□□□ -1.82
LIG1P18858 AC005326.1-201ENST00000429197 123 ntBASIC3.67□□□□□ -1.82
LIG1P18858 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.67□□□□□ -1.82
LIG1P18858 Z75741.1-201ENST00000446793 314 ntBASIC3.67□□□□□ -1.82
LIG1P18858 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.67□□□□□ -1.82
LIG1P18858 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.67□□□□□ -1.82
LIG1P18858 AC022616.8-201ENST00000533569 253 ntBASIC3.67□□□□□ -1.82
LIG1P18858 AC090616.3-201ENST00000582184 217 ntBASIC3.67□□□□□ -1.82
LIG1P18858 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.67□□□□□ -1.82
LIG1P18858 AC008264.2-201ENST00000610193 3731 ntBASIC3.67□□□□□ -1.82
LIG1P18858 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIG1P18858 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LIG1P18858 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIG1P18858 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIG1P18858 AC100821.1-201ENST00000523153 2479 ntBASIC3.66□□□□□ -1.82
LIG1P18858 AC010332.2-201ENST00000613083 1904 ntBASIC3.66□□□□□ -1.82
LIG1P18858 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.66□□□□□ -1.82
LIG1P18858 RNU6-655P-201ENST00000362858 107 ntBASIC3.66□□□□□ -1.82
LIG1P18858 RNU6-1180P-201ENST00000364935 107 ntBASIC3.66□□□□□ -1.82
LIG1P18858 Y_RNA.310-201ENST00000365063 113 ntBASIC3.66□□□□□ -1.82
LIG1P18858 MIR147B-201ENST00000390185 80 ntBASIC3.66□□□□□ -1.82
LIG1P18858 RNA5SP120-201ENST00000410900 112 ntBASIC3.66□□□□□ -1.82
LIG1P18858 RPL32P35-201ENST00000415214 394 ntBASIC3.66□□□□□ -1.82
LIG1P18858 AL365496.1-201ENST00000426885 215 ntBASIC3.66□□□□□ -1.82
LIG1P18858 AC008267.6-201ENST00000441664 139 ntBASIC3.66□□□□□ -1.82
LIG1P18858 RPS27P26-201ENST00000494583 239 ntBASIC3.66□□□□□ -1.82
LIG1P18858 AC107027.2-201ENST00000512197 115 ntBASIC3.66□□□□□ -1.82
LIG1P18858 RNU1-117P-201ENST00000517041 158 ntBASIC3.66□□□□□ -1.82
LIG1P18858 AC026241.1-201ENST00000517873 2142 ntBASIC3.66□□□□□ -1.82
LIG1P18858 Y_RNA.802-201ENST00000614892 130 ntBASIC3.66□□□□□ -1.82
LIG1P18858 U6.115-201ENST00000636045 103 ntBASIC3.66□□□□□ -1.82
LIG1P18858 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
LIG1P18858 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LIG1P18858 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIG1P18858 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LIG1P18858 RNU1-57P-201ENST00000384491 166 ntBASIC3.65□□□□□ -1.83
LIG1P18858 SNORA46-201ENST00000384762 135 ntBASIC3.65□□□□□ -1.83
LIG1P18858 SNORA40-201ENST00000388090 126 ntBASIC3.65□□□□□ -1.83
LIG1P18858 MIR526A2-201ENST00000390198 65 ntBASIC3.65□□□□□ -1.83
LIG1P18858 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.65□□□□□ -1.83
LIG1P18858 DNAJC19P2-201ENST00000593340 302 ntBASIC3.65□□□□□ -1.83
LIG1P18858 RPL17P51-201ENST00000605218 238 ntBASIC3.65□□□□□ -1.83
LIG1P18858 AC091953.5-201ENST00000622919 233 ntBASIC3.65□□□□□ -1.83
LIG1P18858 AC008873.1-201ENST00000625051 138 ntBASIC3.65□□□□□ -1.83
LIG1P18858 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.65□□□□□ -1.83
LIG1P18858 AC069528.2-201ENST00000624849 1991 ntBASIC3.65□□□□□ -1.83
LIG1P18858 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
LIG1P18858 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIG1P18858 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
LIG1P18858 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIG1P18858 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.64□□□□□ -1.83
LIG1P18858 RNU4-10P-201ENST00000364383 140 ntBASIC3.64□□□□□ -1.83
LIG1P18858 Y_RNA.293-201ENST00000364908 93 ntBASIC3.64□□□□□ -1.83
LIG1P18858 Y_RNA.341-201ENST00000365341 102 ntBASIC3.64□□□□□ -1.83
LIG1P18858 U8.9-201ENST00000365667 134 ntBASIC3.64□□□□□ -1.83
LIG1P18858 MIR616-201ENST00000385293 97 ntBASIC3.64□□□□□ -1.83
LIG1P18858 RPS12P18-201ENST00000442381 270 ntBASIC3.64□□□□□ -1.83
LIG1P18858 AC074290.1-201ENST00000448883 135 ntBASIC3.64□□□□□ -1.83
LIG1P18858 SNORA70.24-201ENST00000517233 118 ntBASIC3.64□□□□□ -1.83
LIG1P18858 AC109810.1-201ENST00000534066 224 ntBASIC3.64□□□□□ -1.83
LIG1P18858 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.64□□□□□ -1.83
LIG1P18858 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.64□□□□□ -1.83
LIG1P18858 AC025281.1-201ENST00000567026 265 ntBASIC3.64□□□□□ -1.83
LIG1P18858 MIR2682-201ENST00000580305 110 ntBASIC3.64□□□□□ -1.83
LIG1P18858 AL161756.2-201ENST00000604597 246 ntBASIC3.64□□□□□ -1.83
LIG1P18858 UCA1.1-201ENST00000620952 75 ntBASIC3.64□□□□□ -1.83
LIG1P18858 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LIG1P18858 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.64□□□□□ -1.83
LIG1P18858 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.63□□□□□ -1.83
LIG1P18858 AC093010.3-201ENST00000570269 15214 ntBASIC3.63□□□□□ -1.83
LIG1P18858 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.63□□□□□ -1.83
LIG1P18858 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LIG1P18858 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
LIG1P18858 RNU6-1048P-201ENST00000364054 107 ntBASIC3.63□□□□□ -1.83
LIG1P18858 RNA5SP205-201ENST00000364653 136 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms