Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 BNIP3P26-201ENST00000600827 554 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 AC011155.2-201ENST00000623202 216 ntBASIC-0.61□□□□□ -2.51
HIST1H1DP16402 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.62□□□□□ -2.51
HIST1H1DP16402 RNU6-428P-201ENST00000362942 107 ntBASIC-0.62□□□□□ -2.51
HIST1H1DP16402 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.62□□□□□ -2.51
HIST1H1DP16402 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.62□□□□□ -2.51
HIST1H1DP16402 RNU7-159P-201ENST00000459284 62 ntBASIC-0.62□□□□□ -2.51
HIST1H1DP16402 RNU7-129P-201ENST00000516128 62 ntBASIC-0.62□□□□□ -2.51
HIST1H1DP16402 MIR544B-201ENST00000582372 78 ntBASIC-0.62□□□□□ -2.51
HIST1H1DP16402 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-0.62□□□□□ -2.51
HIST1H1DP16402 SNORA36.1-201ENST00000363424 132 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU6-25P-201ENST00000383873 107 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU6-48P-201ENST00000384161 107 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU6-15P-201ENST00000384534 107 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU6-925P-201ENST00000384629 104 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU6-29P-201ENST00000384637 107 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU6-269P-201ENST00000391077 97 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 SNORD100-201ENST00000408573 76 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNA5SP127-201ENST00000411051 133 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.63□□□□□ -2.51
HIST1H1DP16402 CALM2P2-201ENST00000428512 440 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.63□□□□□ -2.51
HIST1H1DP16402 MTND1P12-201ENST00000455231 147 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU7-56P-201ENST00000458744 62 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.63□□□□□ -2.51
HIST1H1DP16402 RNU4-49P-201ENST00000516080 140 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 MRPS36P4-201ENST00000534436 298 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 AC027288.2-201ENST00000553028 243 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 AL158211.1-201ENST00000566763 763 ntBASIC-0.63□□□□□ -2.51
HIST1H1DP16402 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.63□□□□□ -2.51
HIST1H1DP16402 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.64□□□□□ -2.51
HIST1H1DP16402 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 MIR454-201ENST00000390180 115 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 MIR1302-7-201ENST00000408841 72 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 AC015818.7-201ENST00000428754 109 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 AL117351.1-201ENST00000438864 766 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 AC087499.7-201ENST00000441958 109 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 AC069271.1-201ENST00000445577 156 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-0.64□□□□□ -2.51
HIST1H1DP16402 RNU7-165P-201ENST00000458864 60 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 RNU6-977P-201ENST00000516411 103 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 RNU6-88P-201ENST00000606801 100 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 AC072039.2-201ENST00000608883 439 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 AC006927.2-201ENST00000639256 389 ntBASIC-0.64□□□□□ -2.51
HIST1H1DP16402 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
HIST1H1DP16402 MTND4P4-201ENST00000439033 1366 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 MIR520C-201ENST00000385005 87 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 MIR613-201ENST00000385248 95 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 RNA5SP482-201ENST00000391269 118 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 RPS26P42-201ENST00000413485 326 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AL117339.3-201ENST00000418733 162 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-0.65□□□□□ -2.51
HIST1H1DP16402 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.65□□□□□ -2.51
HIST1H1DP16402 RNU6-848P-201ENST00000515948 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 RNU6-617P-201ENST00000516147 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 RNU6-473P-201ENST00000516164 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 RNU6-430P-201ENST00000517078 107 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AC087894.1-201ENST00000538359 518 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AC093027.1-201ENST00000546698 429 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AP001836.1-201ENST00000604675 523 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AC006157.1-201ENST00000611750 366 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AL355073.2-201ENST00000612106 557 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 uc_338.6-201ENST00000613544 171 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 AL008636.1-201ENST00000625038 1018 ntBASIC-0.65□□□□□ -2.51
HIST1H1DP16402 RNU6-560P-201ENST00000364007 108 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 SNORD14C-201ENST00000365382 88 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 SNORA67.2-201ENST00000384300 149 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 MIR562-201ENST00000384894 95 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 MIR891A-201ENST00000401237 79 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 AC004866.1-201ENST00000411748 78 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 AC005534.2-201ENST00000431047 433 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 AC005042.3-201ENST00000453230 174 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.66□□□□□ -2.52
HIST1H1DP16402 SNORD126-201ENST00000459475 77 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 SNORA74.3-201ENST00000517108 154 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.66□□□□□ -2.52
HIST1H1DP16402 AC009712.1-201ENST00000564938 316 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 MIR4645-201ENST00000583158 77 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 AL078596.1-201ENST00000624856 447 ntBASIC-0.66□□□□□ -2.52
HIST1H1DP16402 AC005592.1-201ENST00000566527 1640 ntBASIC-0.67□□□□□ -2.52
HIST1H1DP16402 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.67□□□□□ -2.52
HIST1H1DP16402 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.67□□□□□ -2.52
HIST1H1DP16402 AC114811.1-201ENST00000507207 168 ntBASIC-0.67□□□□□ -2.52
HIST1H1DP16402 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.67□□□□□ -2.52
HIST1H1DP16402 RNU2-56P-201ENST00000516826 190 ntBASIC-0.67□□□□□ -2.52
HIST1H1DP16402 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.67□□□□□ -2.52
HIST1H1DP16402 AC013828.2-201ENST00000532487 235 ntBASIC-0.67□□□□□ -2.52
HIST1H1DP16402 AC008521.1-201ENST00000587471 187 ntBASIC-0.67□□□□□ -2.52
HIST1H1DP16402 AC011921.3-201ENST00000605540 361 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 482 ms