Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MIR7-1-201ENST00000384871 110 ntBASIC-1.6□□□□□ -2.67
VCANP13611 AL117339.3-201ENST00000418733 162 ntBASIC-1.6□□□□□ -2.67
VCANP13611 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-1.6□□□□□ -2.67
VCANP13611 AL360271.2-201ENST00000447710 161 ntBASIC-1.6□□□□□ -2.67
VCANP13611 RNU7-157P-201ENST00000459600 66 ntBASIC-1.6□□□□□ -2.67
VCANP13611 AC097473.1-201ENST00000508142 408 ntBASIC-1.6□□□□□ -2.67
VCANP13611 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-1.6□□□□□ -2.67
VCANP13611 AC023510.2-201ENST00000622162 746 ntBASIC-1.6□□□□□ -2.67
VCANP13611 CDR1-202ENST00000625883 1485 ntBASIC-1.6□□□□□ -2.67
VCANP13611 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-1.6□□□□□ -2.67
VCANP13611 RNU6-263P-201ENST00000363811 107 ntBASIC-1.6□□□□□ -2.67
VCANP13611 RNU6-987P-201ENST00000384759 104 ntBASIC-1.6□□□□□ -2.67
VCANP13611 MIR135A2-201ENST00000384854 100 ntBASIC-1.6□□□□□ -2.67
VCANP13611 MIR518F-201ENST00000384973 87 ntBASIC-1.6□□□□□ -2.67
VCANP13611 AC127391.1-201ENST00000411737 98 ntBASIC-1.6□□□□□ -2.67
VCANP13611 ELOCP21-201ENST00000412558 336 ntBASIC-1.6□□□□□ -2.67
VCANP13611 RNU6-1282P-201ENST00000516735 96 ntBASIC-1.6□□□□□ -2.67
VCANP13611 RNU6-410P-201ENST00000517006 107 ntBASIC-1.6□□□□□ -2.67
VCANP13611 RNU6-655P-201ENST00000362858 107 ntBASIC-1.61□□□□□ -2.67
VCANP13611 RNU6-1331P-201ENST00000363658 106 ntBASIC-1.61□□□□□ -2.67
VCANP13611 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.61□□□□□ -2.67
VCANP13611 ATM-228ENST00000639240 498 ntTSL 5 BASIC-1.61□□□□□ -2.67
VCANP13611 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.61□□□□□ -2.67
VCANP13611 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.61□□□□□ -2.67
VCANP13611 AL451046.2-201ENST00000403074 277 ntBASIC-1.61□□□□□ -2.67
VCANP13611 MTCYBP38-201ENST00000417160 1123 ntBASIC-1.61□□□□□ -2.67
VCANP13611 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-1.61□□□□□ -2.67
VCANP13611 LAMTOR3P2-201ENST00000504479 232 ntBASIC-1.61□□□□□ -2.67
VCANP13611 RNU6-850P-201ENST00000516934 103 ntBASIC-1.61□□□□□ -2.67
VCANP13611 AC018926.1-201ENST00000616335 435 ntBASIC-1.61□□□□□ -2.67
VCANP13611 RNU6-396P-201ENST00000365369 105 ntBASIC-1.61□□□□□ -2.67
VCANP13611 MIR588-201ENST00000384900 83 ntBASIC-1.61□□□□□ -2.67
VCANP13611 AC006548.1-201ENST00000427470 102 ntBASIC-1.61□□□□□ -2.67
VCANP13611 RNU6-678P-201ENST00000516832 109 ntBASIC-1.61□□□□□ -2.67
VCANP13611 RN7SKP256-201ENST00000517201 314 ntBASIC-1.61□□□□□ -2.67
VCANP13611 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-1.61□□□□□ -2.67
VCANP13611 AL442663.2-201ENST00000554385 511 ntBASIC-1.61□□□□□ -2.67
VCANP13611 MIR4709-201ENST00000577272 72 ntBASIC-1.61□□□□□ -2.67
VCANP13611 MIR3169-201ENST00000578032 83 ntBASIC-1.61□□□□□ -2.67
VCANP13611 CR381572.1-201ENST00000625098 102 ntBASIC-1.61□□□□□ -2.67
VCANP13611 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.62□□□□□ -2.67
VCANP13611 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.62□□□□□ -2.67
VCANP13611 AC006600.1-201ENST00000572529 153 ntBASIC-1.62□□□□□ -2.67
VCANP13611 RNU6-78P-201ENST00000362897 107 ntBASIC-1.62□□□□□ -2.67
VCANP13611 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-1.62□□□□□ -2.67
VCANP13611 snoU13.27-201ENST00000459278 104 ntBASIC-1.62□□□□□ -2.67
VCANP13611 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-1.62□□□□□ -2.67
VCANP13611 AC127455.1-201ENST00000565496 145 ntBASIC-1.62□□□□□ -2.67
VCANP13611 MIR3976-201ENST00000606807 139 ntBASIC-1.62□□□□□ -2.67
VCANP13611 AL162376.1-201ENST00000624117 175 ntBASIC-1.62□□□□□ -2.67
VCANP13611 AL356094.1-201ENST00000624663 1212 ntBASIC-1.62□□□□□ -2.67
VCANP13611 AC097372.4-201ENST00000625025 466 ntBASIC-1.62□□□□□ -2.67
VCANP13611 SNORD115-33-201ENST00000363723 82 ntBASIC-1.63□□□□□ -2.67
VCANP13611 RPL23AP75-201ENST00000491601 451 ntBASIC-1.63□□□□□ -2.67
VCANP13611 DEFB131D-201ENST00000526803 184 ntBASIC-1.63□□□□□ -2.67
VCANP13611 DEFB131C-201ENST00000528817 165 ntBASIC-1.63□□□□□ -2.67
VCANP13611 Y_RNA.513-201ENST00000384522 100 ntBASIC-1.63□□□□□ -2.67
VCANP13611 MIR190B-201ENST00000401119 79 ntBASIC-1.63□□□□□ -2.67
VCANP13611 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-1.63□□□□□ -2.67
VCANP13611 FO393419.3-201ENST00000428741 282 ntBASIC-1.63□□□□□ -2.67
VCANP13611 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.63□□□□□ -2.67
VCANP13611 NDUFA8P1-201ENST00000605525 367 ntBASIC-1.63□□□□□ -2.67
VCANP13611 AC017037.3-201ENST00000625016 472 ntBASIC-1.63□□□□□ -2.67
VCANP13611 AC099654.8-201ENST00000637757 681 ntBASIC-1.63□□□□□ -2.67
VCANP13611 RNU6-1019P-201ENST00000364424 107 ntBASIC-1.64□□□□□ -2.67
VCANP13611 SNORD115-26-201ENST00000365067 82 ntBASIC-1.64□□□□□ -2.67
VCANP13611 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.64□□□□□ -2.67
VCANP13611 RNU6-466P-201ENST00000391224 103 ntBASIC-1.64□□□□□ -2.67
VCANP13611 MTATP6P30-201ENST00000443540 664 ntBASIC-1.64□□□□□ -2.67
VCANP13611 SNORD18.2-201ENST00000459604 70 ntBASIC-1.64□□□□□ -2.67
VCANP13611 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-1.64□□□□□ -2.67
VCANP13611 RNU6-1176P-201ENST00000390955 107 ntBASIC-1.64□□□□□ -2.67
VCANP13611 RNU6-57P-201ENST00000411348 103 ntBASIC-1.64□□□□□ -2.67
VCANP13611 AC104073.1-201ENST00000451988 151 ntBASIC-1.64□□□□□ -2.67
VCANP13611 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.64□□□□□ -2.67
VCANP13611 AC022483.1-201ENST00000514020 567 ntBASIC-1.64□□□□□ -2.67
VCANP13611 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC-1.64□□□□□ -2.67
VCANP13611 RNU6-490P-201ENST00000362985 107 ntBASIC-1.64□□□□□ -2.67
VCANP13611 MIR9-2-201ENST00000384838 87 ntBASIC-1.64□□□□□ -2.67
VCANP13611 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.64□□□□□ -2.67
VCANP13611 CALM2P4-201ENST00000430810 426 ntBASIC-1.64□□□□□ -2.67
VCANP13611 MTCO3P8-201ENST00000453691 755 ntBASIC-1.64□□□□□ -2.67
VCANP13611 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.64□□□□□ -2.67
VCANP13611 RNU1-86P-201ENST00000516108 154 ntBASIC-1.64□□□□□ -2.67
VCANP13611 RNU1-107P-201ENST00000516617 154 ntBASIC-1.64□□□□□ -2.67
VCANP13611 MIR6818-201ENST00000621576 65 ntBASIC-1.64□□□□□ -2.67
VCANP13611 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-1.64□□□□□ -2.67
VCANP13611 AC120349.3-201ENST00000624377 529 ntBASIC-1.64□□□□□ -2.67
VCANP13611 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.65□□□□□ -2.67
VCANP13611 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.65□□□□□ -2.67
VCANP13611 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.65□□□□□ -2.67
VCANP13611 MIR29B1-201ENST00000385015 81 ntBASIC-1.65□□□□□ -2.67
VCANP13611 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-1.65□□□□□ -2.67
VCANP13611 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.65□□□□□ -2.67
VCANP13611 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.65□□□□□ -2.67
VCANP13611 Y_RNA.287-201ENST00000364853 94 ntBASIC-1.65□□□□□ -2.67
VCANP13611 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.65□□□□□ -2.67
VCANP13611 RNU6-977P-201ENST00000516411 103 ntBASIC-1.65□□□□□ -2.67
VCANP13611 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-1.65□□□□□ -2.67
VCANP13611 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms