Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD8P13378 RNA5SP432-201ENST00000362480 116 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 SNORD116-13-201ENST00000384408 92 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 RNU6-476P-201ENST00000384726 107 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 Y_RNA.587-201ENST00000391210 103 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 AL512604.1-201ENST00000404812 257 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 RHEBP3-201ENST00000411920 351 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 AC006028.1-201ENST00000438379 402 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 RNU7-14P-201ENST00000459331 62 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 RNU7-57P-201ENST00000459540 60 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXD8P13378 PDCD5P2-201ENST00000507570 312 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 AC110741.2-201ENST00000605278 268 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 uc_338.14-201ENST00000613162 166 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 MIR6129-201ENST00000616087 109 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 AC244205.2-202ENST00000635781 342 ntBASIC3.71□□□□□ -1.82
HOXD8P13378 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HOXD8P13378 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXD8P13378 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXD8P13378 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HOXD8P13378 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
HOXD8P13378 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD8P13378 RNU6-235P-201ENST00000362644 107 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 RNU4-13P-201ENST00000364019 141 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 SNORA20B-201ENST00000384220 132 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 Y_RNA.525-201ENST00000384570 113 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 MIR29B2-201ENST00000385055 81 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 RNU6-437P-201ENST00000459408 95 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 RPL27AP5-201ENST00000469428 449 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 SNORA70.19-201ENST00000516717 90 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 RNU7-116P-201ENST00000516940 62 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXD8P13378 AC127455.1-201ENST00000565496 145 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 RPL30P11-203ENST00000598995 310 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 AP003357.1-201ENST00000604497 148 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 AL138880.2-201ENST00000616214 239 ntBASIC3.7□□□□□ -1.82
HOXD8P13378 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD8P13378 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HOXD8P13378 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HOXD8P13378 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXD8P13378 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
HOXD8P13378 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXD8P13378 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXD8P13378 AL355596.1-201ENST00000565399 3996 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 AL356292.1-201ENST00000283110 373 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 SNORD114-7-201ENST00000362520 77 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 RNA5SP252-201ENST00000391131 119 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 MIR300-201ENST00000401138 83 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 AL139095.1-201ENST00000404326 391 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 MIR1283-1-201ENST00000408494 87 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 RNU4-43P-201ENST00000410628 137 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 AC097463.2-201ENST00000421074 142 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 AC245047.4-201ENST00000433189 144 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 MIR449C-201ENST00000516047 92 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 SNORA31.21-201ENST00000517180 77 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 CYCSP26-201ENST00000534107 320 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 MIR378D2-201ENST00000580636 98 ntBASIC3.69□□□□□ -1.82
HOXD8P13378 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD8P13378 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HOXD8P13378 RNU1-70P-201ENST00000362618 164 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXD8P13378 AL355796.1-201ENST00000406706 323 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD8P13378 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD8P13378 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXD8P13378 RPS26P55-201ENST00000471178 356 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 AC006445.1-201ENST00000491925 405 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 AC093331.1-201ENST00000521474 169 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 AC120024.3-201ENST00000603167 156 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 AC005972.2-201ENST00000604690 348 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD8P13378 RNVU1-4-201ENST00000612985 164 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXD8P13378 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD8P13378 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD8P13378 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXD8P13378 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD8P13378 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXD8P13378 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HOXD8P13378 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD8P13378 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.68□□□□□ -1.82
HOXD8P13378 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD8P13378 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXD8P13378 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXD8P13378 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HOXD8P13378 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXD8P13378 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
HOXD8P13378 SNORA27.1-201ENST00000362604 124 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 SNORA25.7-201ENST00000364375 127 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 RNU6-1082P-201ENST00000364574 107 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 Y_RNA.294-201ENST00000364916 102 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 MIR181A2-201ENST00000384863 110 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 MIR1294-201ENST00000408503 142 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 RNA5SP229-201ENST00000410809 99 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 RNU6-57P-201ENST00000411348 103 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 AL159169.1-201ENST00000421119 127 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 CYCTP-201ENST00000504253 315 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.67□□□□□ -1.82
HOXD8P13378 MIR4765-201ENST00000585007 77 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms