Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNU6-975P-201ENST00000384296 105 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 RNU6-31P-201ENST00000384388 108 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 RNU6-1157P-201ENST00000384456 106 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 AC015818.7-201ENST00000428754 109 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 AC087499.7-201ENST00000441958 109 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 SUMO1P2-201ENST00000452524 304 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 RNU5F-2P-201ENST00000516066 82 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 RNU6-469P-201ENST00000516253 101 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 AC084368.1-201ENST00000620935 65 ntBASIC-2.08□□□□□ -2.74
TOP2AP11388 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-1151P-201ENST00000384684 107 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 SNORD64-201ENST00000386683 67 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNY4P36-201ENST00000391116 96 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-447P-201ENST00000410293 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-1118P-201ENST00000410382 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-1076P-201ENST00000410397 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-355P-201ENST00000410427 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-791P-201ENST00000410467 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU2-23P-201ENST00000410545 195 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-1100P-201ENST00000410691 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-860P-201ENST00000410860 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-1199P-201ENST00000411249 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-1217P-201ENST00000411276 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 RNU6-785P-201ENST00000411324 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 MTCO1P17-201ENST00000411522 491 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-2.09□□□□□ -2.74
TOP2AP11388 USP9YP16-201ENST00000430287 407 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-2.09□□□□□ -2.74
TOP2AP11388 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-2.09□□□□□ -2.74
TOP2AP11388 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-2.09□□□□□ -2.74
TOP2AP11388 MIR378D2-201ENST00000580636 98 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 MIR4280-201ENST00000582178 76 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 AC020891.4-201ENST00000605745 93 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 U6.90-201ENST00000614007 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 U6.70-201ENST00000620287 104 ntBASIC-2.09□□□□□ -2.74
TOP2AP11388 MIR876-201ENST00000401147 81 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-2.1□□□□□ -2.75
TOP2AP11388 TIMM9P3-201ENST00000428659 274 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 MTND1P31-201ENST00000449206 961 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 AC046134.1-201ENST00000514454 666 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 MRPS18CP4-201ENST00000535821 231 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 MTND4P33-201ENST00000556706 766 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-2.1□□□□□ -2.75
TOP2AP11388 MIR5591-201ENST00000578248 65 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-2.1□□□□□ -2.75
TOP2AP11388 AC008250.2-201ENST00000615261 205 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 AL603758.1-201ENST00000618654 241 ntBASIC-2.1□□□□□ -2.75
TOP2AP11388 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC-2.1□□□□□ -2.75
TOP2AP11388 SNORA33-201ENST00000363664 130 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 RNU6-370P-201ENST00000411008 104 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-2.11□□□□□ -2.75
TOP2AP11388 RNU7-73P-201ENST00000458743 63 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 RPS29P27-201ENST00000463711 170 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 RPL23AP75-201ENST00000491601 451 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 AC026421.1-201ENST00000519101 163 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-2.11□□□□□ -2.75
TOP2AP11388 AC090617.3-201ENST00000573670 475 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 MIR4770-201ENST00000579149 58 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 AC005609.4-201ENST00000625071 447 ntBASIC-2.11□□□□□ -2.75
TOP2AP11388 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-2.11□□□□□ -2.75
TOP2AP11388 RNU6-613P-201ENST00000410412 108 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 DPRXP1-201ENST00000426312 460 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.12□□□□□ -2.75
TOP2AP11388 RNU6-840P-201ENST00000517275 65 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AC104383.1-201ENST00000530297 370 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 RNU6-502P-201ENST00000362419 108 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 Y_RNA.62-201ENST00000362840 99 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 BTF3L4P3-201ENST00000418879 476 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 RPP40P1-201ENST00000426762 456 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 UBE2D3P3-201ENST00000426992 425 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 CALM2P4-201ENST00000430810 426 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AC010153.1-201ENST00000432862 727 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AC010531.2-201ENST00000465012 153 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AC104629.2-201ENST00000468627 598 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AC024995.1-201ENST00000523014 93 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-2.12□□□□□ -2.75
TOP2AP11388 AC010525.2-201ENST00000590920 195 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AP001330.5-201ENST00000607176 411 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 AC010133.1-201ENST00000615809 842 ntBASIC-2.12□□□□□ -2.75
TOP2AP11388 MTND5P18-201ENST00000445624 1801 ntBASIC-2.13□□□□□ -2.75
TOP2AP11388 SNORD32B-201ENST00000364460 84 ntBASIC-2.13□□□□□ -2.75
TOP2AP11388 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-2.13□□□□□ -2.75
TOP2AP11388 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.13□□□□□ -2.75
TOP2AP11388 RNU6-843P-201ENST00000384454 104 ntBASIC-2.13□□□□□ -2.75
TOP2AP11388 AL445193.1-201ENST00000441183 141 ntBASIC-2.13□□□□□ -2.75
TOP2AP11388 AC006600.1-201ENST00000572529 153 ntBASIC-2.13□□□□□ -2.75
TOP2AP11388 AC022217.4-201ENST00000604389 163 ntBASIC-2.13□□□□□ -2.75
TOP2AP11388 MIR382-201ENST00000637119 76 ntBASIC-2.13□□□□□ -2.75
TOP2AP11388 Y_RNA.537-201ENST00000384626 109 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 AL627311.1-201ENST00000431514 115 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 RNU7-102P-201ENST00000458948 62 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 RNU6-448P-201ENST00000517052 107 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 MIR3179-1-201ENST00000578940 84 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 MIR3179-2-201ENST00000579107 84 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 MIR3179-3-201ENST00000579566 84 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 MIR3179-4-201ENST00000617599 84 ntBASIC-2.14□□□□□ -2.75
TOP2AP11388 AC112204.3-201ENST00000623822 332 ntBASIC-2.14□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms