Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 SNORA31.10-201ENST00000516482 106 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 RNU6-344P-201ENST00000516635 111 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 SCARNA1-201ENST00000517138 166 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 AF235103.2-201ENST00000525753 346 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 DEFB131C-201ENST00000528817 165 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.05□□□□□ -2.4
PTPRFP10586 AP003168.1-201ENST00000530091 307 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.05□□□□□ -2.4
PTPRFP10586 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.05□□□□□ -2.4
PTPRFP10586 MIR3192-201ENST00000584920 77 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 AC092354.1-201ENST00000606057 376 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 AC068137.4-201ENST00000638485 296 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 RNU6-1317P-201ENST00000364582 104 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 MIR140-201ENST00000385282 100 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 SNORA12.1-201ENST00000390873 148 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 U8.16-201ENST00000391279 133 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 RNA5SP222-201ENST00000411039 105 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 Z99497.1-201ENST00000421282 135 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.05□□□□□ -2.4
PTPRFP10586 MTATP6P16-201ENST00000434543 526 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.05□□□□□ -2.4
PTPRFP10586 RPS29P27-201ENST00000463711 170 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 AC108740.1-201ENST00000498629 225 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 AC097462.1-201ENST00000514125 324 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 ZNF519P3-201ENST00000557158 1032 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 SNORA28-201ENST00000606769 126 ntBASIC0.05□□□□□ -2.4
PTPRFP10586 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.05□□□□□ -2.4
PTPRFP10586 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.05□□□□□ -2.4
PTPRFP10586 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.05□□□□□ -2.4
PTPRFP10586 MIRLET7C-201ENST00000362160 84 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 RNU6-827P-201ENST00000365553 106 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 RNU6-393P-201ENST00000384475 107 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 RNU6-83P-201ENST00000384568 112 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 SNORA2B-201ENST00000384583 137 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 MIR562-201ENST00000384894 95 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 RNU6-550P-201ENST00000391057 101 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 HMGN2P26-201ENST00000463169 339 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 OR9P1P-201ENST00000496431 281 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 RNU7-99P-201ENST00000516271 62 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 RNU6-410P-201ENST00000517006 107 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.04□□□□□ -2.4
PTPRFP10586 AL359999.1-201ENST00000604513 294 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 AC017083.3-201ENST00000609955 700 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 U6.114-201ENST00000636407 96 ntBASIC0.04□□□□□ -2.4
PTPRFP10586 MIR411-201ENST00000362239 96 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 RNU4-45P-201ENST00000365469 141 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 SNORD73A-201ENST00000386062 65 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 RNU6-1093P-201ENST00000391194 107 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 MRPL42P3-201ENST00000401492 326 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.03□□□□□ -2.4
PTPRFP10586 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.03□□□□□ -2.4
PTPRFP10586 AL512286.1-201ENST00000439244 400 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.03□□□□□ -2.4
PTPRFP10586 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.03□□□□□ -2.4
PTPRFP10586 CYCTP-201ENST00000504253 315 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.03□□□□□ -2.4
PTPRFP10586 AC010493.1-201ENST00000513479 292 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 AC105417.1-201ENST00000514691 285 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 AC027419.1-201ENST00000522976 328 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.03□□□□□ -2.4
PTPRFP10586 AC137590.2-201ENST00000619709 240 ntBASIC0.03□□□□□ -2.4
PTPRFP10586 RNU6-809P-201ENST00000384461 107 ntBASIC0.03□□□□□ -2.41
PTPRFP10586 MTCO2P23-201ENST00000425216 680 ntBASIC0.03□□□□□ -2.41
PTPRFP10586 GPR143P-201ENST00000434155 205 ntBASIC0.03□□□□□ -2.41
PTPRFP10586 EPS15P1-201ENST00000448836 336 ntBASIC0.03□□□□□ -2.41
PTPRFP10586 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.03□□□□□ -2.41
PTPRFP10586 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.03□□□□□ -2.41
PTPRFP10586 AL049830.1-201ENST00000468034 425 ntBASIC0.03□□□□□ -2.41
PTPRFP10586 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.03□□□□□ -2.41
PTPRFP10586 MIR4438-201ENST00000585271 93 ntBASIC0.03□□□□□ -2.41
PTPRFP10586 U6.73-201ENST00000619194 103 ntBASIC0.03□□□□□ -2.41
PTPRFP10586 SNORA43.4-201ENST00000629559 138 ntBASIC0.03□□□□□ -2.41
PTPRFP10586 MTND5P16-201ENST00000460269 1703 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 Y_RNA.265-201ENST00000364677 108 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 RNU6-1286P-201ENST00000383871 107 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 RNU6-1000P-201ENST00000391066 106 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.02□□□□□ -2.41
PTPRFP10586 Z98949.2-201ENST00000440996 144 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 MTCO3P8-201ENST00000453691 755 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 TPT1P7-201ENST00000458300 517 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 AC112204.1-201ENST00000502591 103 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 AC116562.3-201ENST00000506136 177 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.02□□□□□ -2.41
PTPRFP10586 RNU6-863P-201ENST00000515989 104 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
PTPRFP10586 AC068587.5-201ENST00000528506 175 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 SUB1P2-201ENST00000556401 297 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 AC022523.2-201ENST00000561045 150 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 MIR3941-201ENST00000582572 103 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 AL355073.2-201ENST00000612106 557 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 AC009159.2-201ENST00000617603 606 ntBASIC0.02□□□□□ -2.41
PTPRFP10586 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
PTPRFP10586 SNORA36A-201ENST00000384221 132 ntBASIC0.01□□□□□ -2.41
PTPRFP10586 RNA5SP482-201ENST00000391269 118 ntBASIC0.01□□□□□ -2.41
PTPRFP10586 MIR320B2-201ENST00000408479 138 ntBASIC0.01□□□□□ -2.41
PTPRFP10586 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.01□□□□□ -2.41
PTPRFP10586 RPS26P42-201ENST00000413485 326 ntBASIC0.01□□□□□ -2.41
PTPRFP10586 MTCO2P3-201ENST00000442543 421 ntBASIC0.01□□□□□ -2.41
PTPRFP10586 SNORD65B-201ENST00000459126 73 ntBASIC0.01□□□□□ -2.41
PTPRFP10586 AC007215.1-201ENST00000464893 276 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms