Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC058791.1-201ENST00000608412 3198 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AC091152.2-201ENST00000591628 2569 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 RNU1-70P-201ENST00000362618 164 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 RNA5SP139-201ENST00000364340 117 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 SNORA18.3-201ENST00000384122 132 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-768P-201ENST00000384683 107 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AL031003.1-201ENST00000404229 172 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AC126124.2-201ENST00000413542 321 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AL121914.1-201ENST00000450188 156 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 RNU7-170P-201ENST00000459303 61 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 MRPS36P2-201ENST00000512569 299 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AC008885.1-201ENST00000514930 301 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AP001328.1-201ENST00000528550 176 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AC022149.2-201ENST00000621061 203 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AP001340.1-201ENST00000624405 217 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 AC026241.1-201ENST00000517873 2142 ntBASIC4.33□□□□□ -1.72
CSB-PGBD3P0DP91 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 RNA5SP322-201ENST00000363617 119 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 SNORD115-30-201ENST00000364117 82 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-1180P-201ENST00000364935 107 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-643P-201ENST00000384018 107 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-1083P-201ENST00000384022 107 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 MIR15B-201ENST00000385045 98 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 AL355497.1-201ENST00000406262 551 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 AL353705.1-201ENST00000433468 480 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 SCARNA17.1-201ENST00000516211 143 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 SCARNA17.2-201ENST00000516334 143 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-107P-201ENST00000516643 102 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 UBL5P2-201ENST00000583788 219 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 SCARNA17.4-201ENST00000614296 143 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 AC069528.2-201ENST00000624849 1991 ntBASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSB-PGBD3P0DP91 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-755P-201ENST00000364400 103 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 CD24P4-201ENST00000382840 243 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-1264P-201ENST00000383891 107 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 AL031121.1-201ENST00000406553 254 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-588P-201ENST00000410281 105 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 EIF4EP4-201ENST00000424916 578 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 AC027124.2-201ENST00000428249 105 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 RPL23AP67-201ENST00000465341 474 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 RPL31P41-201ENST00000477967 372 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 RNA5SP112-201ENST00000515937 99 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 AC027176.1-201ENST00000560204 514 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 AC023043.3-201ENST00000593113 385 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 AC005562.2-201ENST00000618264 111 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 AC012640.5-201ENST00000623897 319 ntBASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CSB-PGBD3P0DP91 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 Y_RNA.251-201ENST00000364551 99 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 AC004866.1-201ENST00000411748 78 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 RNU6-589P-201ENST00000516485 107 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 AC103810.1-201ENST00000579873 453 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 MIR4672-201ENST00000583126 81 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 RPL12P50-201ENST00000603116 116 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 U7.2-201ENST00000607576 63 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 uc_338.1-201ENST00000612113 180 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 AL391903.3-201ENST00000612158 163 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 MIR6844-201ENST00000637122 62 ntBASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CSB-PGBD3P0DP91 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 SNORD87-201ENST00000364849 89 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 Y_RNA.294-201ENST00000364916 102 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 SNORA22-201ENST00000383907 134 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 RNU1-89P-201ENST00000384592 164 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 CYCSP49-201ENST00000420810 319 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 RN7SKP179-201ENST00000516126 217 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 Y_RNA.712-201ENST00000517011 92 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 MIR2682-201ENST00000580305 110 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 RPL30P11-203ENST00000598995 310 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.29□□□□□ -1.72
CSB-PGBD3P0DP91 AC091564.4-201ENST00000533934 2194 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms