Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RNA5SP504-201ENST00000410676 117 ntBASIC2.17□□□□□ -2.06
MMP2P08253 SRIP3-201ENST00000413200 219 ntBASIC2.17□□□□□ -2.06
MMP2P08253 AL356320.1-201ENST00000429616 163 ntBASIC2.17□□□□□ -2.06
MMP2P08253 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.17□□□□□ -2.06
MMP2P08253 AC007395.1-201ENST00000451333 677 ntBASIC2.17□□□□□ -2.06
MMP2P08253 AC112492.4-201ENST00000456549 352 ntBASIC2.17□□□□□ -2.06
MMP2P08253 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
MMP2P08253 RNU6-475P-201ENST00000516073 104 ntBASIC2.17□□□□□ -2.06
MMP2P08253 AC233702.2-202ENST00000562547 291 ntBASIC2.17□□□□□ -2.06
MMP2P08253 AC026271.5-201ENST00000577873 130 ntBASIC2.17□□□□□ -2.06
MMP2P08253 MIR4680-201ENST00000580906 66 ntBASIC2.17□□□□□ -2.06
MMP2P08253 MIR4753-201ENST00000585119 83 ntBASIC2.17□□□□□ -2.06
MMP2P08253 AC007229.1-201ENST00000590455 412 ntBASIC2.17□□□□□ -2.06
MMP2P08253 AC064859.1-201ENST00000624741 174 ntBASIC2.17□□□□□ -2.06
MMP2P08253 AC068205.3-201ENST00000636385 468 ntBASIC2.17□□□□□ -2.06
MMP2P08253 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
MMP2P08253 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MMP2P08253 ZNF658B-202ENST00000615961 3375 ntBASIC2.16□□□□□ -2.06
MMP2P08253 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MMP2P08253 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.16□□□□□ -2.06
MMP2P08253 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
MMP2P08253 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MMP2P08253 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
MMP2P08253 Y_RNA.332-201ENST00000365271 113 ntBASIC2.16□□□□□ -2.06
MMP2P08253 Y_RNA.424-201ENST00000384063 103 ntBASIC2.16□□□□□ -2.06
MMP2P08253 Y_RNA.645-201ENST00000391229 102 ntBASIC2.16□□□□□ -2.06
MMP2P08253 HMGN2P39-201ENST00000398005 273 ntBASIC2.16□□□□□ -2.06
MMP2P08253 AL023284.1-201ENST00000403956 276 ntBASIC2.16□□□□□ -2.06
MMP2P08253 MIR1262-201ENST00000408276 93 ntBASIC2.16□□□□□ -2.06
MMP2P08253 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
MMP2P08253 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.16□□□□□ -2.06
MMP2P08253 AC016925.1-201ENST00000458303 298 ntBASIC2.16□□□□□ -2.06
MMP2P08253 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.16□□□□□ -2.06
MMP2P08253 AC107222.1-201ENST00000510899 637 ntBASIC2.16□□□□□ -2.06
MMP2P08253 SNORA31.11-201ENST00000516528 139 ntBASIC2.16□□□□□ -2.06
MMP2P08253 RNU6-1137P-201ENST00000517073 99 ntBASIC2.16□□□□□ -2.06
MMP2P08253 AC091544.4-201ENST00000555268 342 ntBASIC2.16□□□□□ -2.06
MMP2P08253 MIR3945-201ENST00000581853 98 ntBASIC2.16□□□□□ -2.06
MMP2P08253 RPS29P30-201ENST00000600975 111 ntBASIC2.16□□□□□ -2.06
MMP2P08253 AL357075.2-201ENST00000614906 189 ntBASIC2.16□□□□□ -2.06
MMP2P08253 AL078596.1-201ENST00000624856 447 ntBASIC2.16□□□□□ -2.06
MMP2P08253 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
MMP2P08253 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
MMP2P08253 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
MMP2P08253 SNORD115-3-201ENST00000363100 82 ntBASIC2.15□□□□□ -2.07
MMP2P08253 SNORD14.1-201ENST00000365609 90 ntBASIC2.15□□□□□ -2.07
MMP2P08253 RNU6-639P-201ENST00000384074 107 ntBASIC2.15□□□□□ -2.07
MMP2P08253 MIR586-201ENST00000385035 97 ntBASIC2.15□□□□□ -2.07
MMP2P08253 AC113618.1-201ENST00000416747 285 ntBASIC2.15□□□□□ -2.07
MMP2P08253 AC123900.1-201ENST00000420390 96 ntBASIC2.15□□□□□ -2.07
MMP2P08253 OOSP1P1-201ENST00000423265 274 ntBASIC2.15□□□□□ -2.07
MMP2P08253 UQCRBP2-201ENST00000447827 297 ntBASIC2.15□□□□□ -2.07
MMP2P08253 PCNPP5-201ENST00000452246 481 ntBASIC2.15□□□□□ -2.07
MMP2P08253 HMGN2P9-201ENST00000476875 229 ntBASIC2.15□□□□□ -2.07
MMP2P08253 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.15□□□□□ -2.07
MMP2P08253 MIR1273D-201ENST00000577266 86 ntBASIC2.15□□□□□ -2.07
MMP2P08253 AL031274.2-201ENST00000599419 203 ntBASIC2.15□□□□□ -2.07
MMP2P08253 AL360085.1-201ENST00000604713 532 ntBASIC2.15□□□□□ -2.07
MMP2P08253 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
MMP2P08253 AC008873.1-201ENST00000625051 138 ntBASIC2.15□□□□□ -2.07
MMP2P08253 U6.92-201ENST00000636464 89 ntBASIC2.15□□□□□ -2.07
MMP2P08253 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
MMP2P08253 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
MMP2P08253 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.15□□□□□ -2.07
MMP2P08253 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
MMP2P08253 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
MMP2P08253 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MMP2P08253 MIRLET7G-201ENST00000362280 84 ntBASIC2.14□□□□□ -2.07
MMP2P08253 Y_RNA.158-201ENST00000363651 101 ntBASIC2.14□□□□□ -2.07
MMP2P08253 AC117470.1-201ENST00000381974 330 ntBASIC2.14□□□□□ -2.07
MMP2P08253 SNORA51.11-201ENST00000384442 131 ntBASIC2.14□□□□□ -2.07
MMP2P08253 SNORA64-201ENST00000384674 134 ntBASIC2.14□□□□□ -2.07
MMP2P08253 SNORA80E-201ENST00000384744 137 ntBASIC2.14□□□□□ -2.07
MMP2P08253 SNORD78.2-201ENST00000391076 69 ntBASIC2.14□□□□□ -2.07
MMP2P08253 AC114982.1-201ENST00000469402 321 ntBASIC2.14□□□□□ -2.07
MMP2P08253 AC010469.2-201ENST00000496412 480 ntBASIC2.14□□□□□ -2.07
MMP2P08253 RNU6-107P-201ENST00000516643 102 ntBASIC2.14□□□□□ -2.07
MMP2P08253 CYCSP23-201ENST00000519781 313 ntBASIC2.14□□□□□ -2.07
MMP2P08253 AC040926.1-201ENST00000530195 238 ntBASIC2.14□□□□□ -2.07
MMP2P08253 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
MMP2P08253 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.14□□□□□ -2.07
MMP2P08253 AC104695.3-201ENST00000604052 296 ntBASIC2.14□□□□□ -2.07
MMP2P08253 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.14□□□□□ -2.07
MMP2P08253 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
MMP2P08253 AC008555.8-201ENST00000623602 2168 ntBASIC2.13□□□□□ -2.07
MMP2P08253 AP006437.1-201ENST00000641440 3685 ntBASIC2.13□□□□□ -2.07
MMP2P08253 AC245060.5-201ENST00000610778 3293 ntBASIC2.13□□□□□ -2.07
MMP2P08253 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
MMP2P08253 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.13□□□□□ -2.07
MMP2P08253 SNORA63C-201ENST00000364578 129 ntBASIC2.13□□□□□ -2.07
MMP2P08253 RNU6-450P-201ENST00000364654 107 ntBASIC2.13□□□□□ -2.07
MMP2P08253 RNU6-418P-201ENST00000384035 107 ntBASIC2.13□□□□□ -2.07
MMP2P08253 SNORA67.3-201ENST00000384366 140 ntBASIC2.13□□□□□ -2.07
MMP2P08253 SNORD14D-201ENST00000384390 87 ntBASIC2.13□□□□□ -2.07
MMP2P08253 RNU6-1160P-201ENST00000384546 104 ntBASIC2.13□□□□□ -2.07
MMP2P08253 MIR606-201ENST00000384851 96 ntBASIC2.13□□□□□ -2.07
MMP2P08253 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
MMP2P08253 MIR548B-201ENST00000385247 97 ntBASIC2.13□□□□□ -2.07
MMP2P08253 SNORA11.4-201ENST00000408823 129 ntBASIC2.13□□□□□ -2.07
MMP2P08253 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms