Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.7□□□□□ -1.98
RHOP08100 AC055872.1-201ENST00000570978 278 ntBASIC2.7□□□□□ -1.98
RHOP08100 AC037487.3-201ENST00000606668 112 ntBASIC2.7□□□□□ -1.98
RHOP08100 SNORD11B-201ENST00000607707 90 ntBASIC2.7□□□□□ -1.98
RHOP08100 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
RHOP08100 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.7□□□□□ -1.98
RHOP08100 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
RHOP08100 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RHOP08100 RNA5SP289-201ENST00000362332 137 ntBASIC2.69□□□□□ -1.98
RHOP08100 snoU2_19.1-201ENST00000362361 80 ntBASIC2.69□□□□□ -1.98
RHOP08100 Y_RNA.331-201ENST00000365267 102 ntBASIC2.69□□□□□ -1.98
RHOP08100 RNU6-1264P-201ENST00000383891 107 ntBASIC2.69□□□□□ -1.98
RHOP08100 Y_RNA.446-201ENST00000384178 104 ntBASIC2.69□□□□□ -1.98
RHOP08100 MIR27B-201ENST00000385129 97 ntBASIC2.69□□□□□ -1.98
RHOP08100 AC027124.2-201ENST00000428249 105 ntBASIC2.69□□□□□ -1.98
RHOP08100 AC004386.2-201ENST00000441858 148 ntBASIC2.69□□□□□ -1.98
RHOP08100 AC005042.3-201ENST00000453230 174 ntBASIC2.69□□□□□ -1.98
RHOP08100 AL139109.1-201ENST00000455491 297 ntBASIC2.69□□□□□ -1.98
RHOP08100 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.69□□□□□ -1.98
RHOP08100 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.69□□□□□ -1.98
RHOP08100 YWHAEP4-201ENST00000505390 198 ntBASIC2.69□□□□□ -1.98
RHOP08100 RNU6-138P-201ENST00000515952 107 ntBASIC2.69□□□□□ -1.98
RHOP08100 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.69□□□□□ -1.98
RHOP08100 U4.3-201ENST00000621047 82 ntBASIC2.69□□□□□ -1.98
RHOP08100 AC008873.1-201ENST00000625051 138 ntBASIC2.69□□□□□ -1.98
RHOP08100 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
RHOP08100 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RHOP08100 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RHOP08100 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RHOP08100 AC010329.5-201ENST00000623497 2174 ntBASIC2.68□□□□□ -1.98
RHOP08100 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RHOP08100 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.68□□□□□ -1.98
RHOP08100 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RHOP08100 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RHOP08100 Y_RNA.44-201ENST00000362676 108 ntBASIC2.68□□□□□ -1.98
RHOP08100 RNU1-72P-201ENST00000362976 153 ntBASIC2.68□□□□□ -1.98
RHOP08100 Y_RNA.277-201ENST00000364754 102 ntBASIC2.68□□□□□ -1.98
RHOP08100 SNORA18.2-201ENST00000383865 132 ntBASIC2.68□□□□□ -1.98
RHOP08100 Y_RNA.415-201ENST00000384012 112 ntBASIC2.68□□□□□ -1.98
RHOP08100 RNU6-1310P-201ENST00000384153 107 ntBASIC2.68□□□□□ -1.98
RHOP08100 Y_RNA.785-201ENST00000384290 109 ntBASIC2.68□□□□□ -1.98
RHOP08100 Y_RNA.498-201ENST00000384460 102 ntBASIC2.68□□□□□ -1.98
RHOP08100 SNORA3.2-201ENST00000408221 125 ntBASIC2.68□□□□□ -1.98
RHOP08100 RNA5SP504-201ENST00000410676 117 ntBASIC2.68□□□□□ -1.98
RHOP08100 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.68□□□□□ -1.98
RHOP08100 AP002001.1-203ENST00000534002 267 ntBASIC2.68□□□□□ -1.98
RHOP08100 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.68□□□□□ -1.98
RHOP08100 RPL30P11-203ENST00000598995 310 ntBASIC2.68□□□□□ -1.98
RHOP08100 AL670379.2-201ENST00000604983 252 ntBASIC2.68□□□□□ -1.98
RHOP08100 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.68□□□□□ -1.98
RHOP08100 AC068205.3-201ENST00000636385 468 ntBASIC2.68□□□□□ -1.98
RHOP08100 MIR7515-201ENST00000637837 67 ntBASIC2.68□□□□□ -1.98
RHOP08100 AC108206.1-201ENST00000570186 4159 ntBASIC2.68□□□□□ -1.98
RHOP08100 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RHOP08100 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
RHOP08100 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.67□□□□□ -1.98
RHOP08100 UBE2WP1-201ENST00000362030 340 ntBASIC2.67□□□□□ -1.98
RHOP08100 SNORA25.1-201ENST00000362326 128 ntBASIC2.67□□□□□ -1.98
RHOP08100 Y_RNA.54-201ENST00000362766 105 ntBASIC2.67□□□□□ -1.98
RHOP08100 RNU6-727P-201ENST00000363592 107 ntBASIC2.67□□□□□ -1.98
RHOP08100 Y_RNA.418-201ENST00000384029 102 ntBASIC2.67□□□□□ -1.98
RHOP08100 MIR518C-201ENST00000384822 101 ntBASIC2.67□□□□□ -1.98
RHOP08100 MIR548I3-201ENST00000408378 149 ntBASIC2.67□□□□□ -1.98
RHOP08100 MIR548I1-201ENST00000408810 149 ntBASIC2.67□□□□□ -1.98
RHOP08100 AL139156.1-201ENST00000412785 841 ntBASIC2.67□□□□□ -1.98
RHOP08100 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.67□□□□□ -1.98
RHOP08100 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.67□□□□□ -1.98
RHOP08100 AC008749.1-201ENST00000597650 306 ntBASIC2.67□□□□□ -1.98
RHOP08100 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.67□□□□□ -1.98
RHOP08100 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.67□□□□□ -1.98
RHOP08100 MIR3674-201ENST00000636576 68 ntBASIC2.67□□□□□ -1.98
RHOP08100 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.67□□□□□ -1.98
RHOP08100 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
RHOP08100 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.67□□□□□ -1.98
RHOP08100 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RHOP08100 Y_RNA.101-201ENST00000363154 102 ntBASIC2.66□□□□□ -1.98
RHOP08100 SNORA72.2-201ENST00000365028 127 ntBASIC2.66□□□□□ -1.98
RHOP08100 Y_RNA.383-201ENST00000383855 97 ntBASIC2.66□□□□□ -1.98
RHOP08100 SNORA67.2-201ENST00000384300 149 ntBASIC2.66□□□□□ -1.98
RHOP08100 RNU2-54P-201ENST00000410299 190 ntBASIC2.66□□□□□ -1.98
RHOP08100 RPL19P1-201ENST00000411635 428 ntBASIC2.66□□□□□ -1.98
RHOP08100 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.66□□□□□ -1.98
RHOP08100 POLR2KP2-201ENST00000438155 177 ntBASIC2.66□□□□□ -1.98
RHOP08100 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
RHOP08100 NDUFB4P10-201ENST00000452541 359 ntBASIC2.66□□□□□ -1.98
RHOP08100 AC130289.1-201ENST00000577321 73 ntBASIC2.66□□□□□ -1.98
RHOP08100 MIR4643-201ENST00000577473 78 ntBASIC2.66□□□□□ -1.98
RHOP08100 MIR5006-201ENST00000583027 110 ntBASIC2.66□□□□□ -1.98
RHOP08100 MIR3616-201ENST00000584070 92 ntBASIC2.66□□□□□ -1.98
RHOP08100 AC004467.1-201ENST00000615678 330 ntBASIC2.66□□□□□ -1.98
RHOP08100 AC006001.4-201ENST00000622243 395 ntBASIC2.66□□□□□ -1.98
RHOP08100 AC091932.3-201ENST00000624223 323 ntBASIC2.66□□□□□ -1.98
RHOP08100 MIR6733-201ENST00000635723 61 ntBASIC2.66□□□□□ -1.98
RHOP08100 MIR7157-201ENST00000635801 60 ntBASIC2.66□□□□□ -1.98
RHOP08100 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RHOP08100 ZNF658B-202ENST00000615961 3375 ntBASIC2.66□□□□□ -1.98
RHOP08100 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
RHOP08100 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.65□□□□□ -1.98
RHOP08100 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.65□□□□□ -1.98
RHOP08100 U8.2-201ENST00000363156 134 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms