Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 U2.17-201ENST00000611454 95 ntBASIC0.22□□□□□ -2.37
CTSDP07339 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.22□□□□□ -2.37
CTSDP07339 AP002371.2-201ENST00000624450 503 ntBASIC0.22□□□□□ -2.37
CTSDP07339 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.22□□□□□ -2.37
CTSDP07339 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
CTSDP07339 MTND5P16-201ENST00000460269 1703 ntBASIC0.21□□□□□ -2.38
CTSDP07339 MIR620-201ENST00000385232 95 ntBASIC0.21□□□□□ -2.38
CTSDP07339 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
CTSDP07339 U8.16-201ENST00000391279 133 ntBASIC0.21□□□□□ -2.38
CTSDP07339 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.21□□□□□ -2.38
CTSDP07339 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.21□□□□□ -2.38
CTSDP07339 AC009961.2-201ENST00000435771 251 ntBASIC0.21□□□□□ -2.38
CTSDP07339 RPS20P10-201ENST00000451209 253 ntBASIC0.21□□□□□ -2.38
CTSDP07339 AC093850.1-201ENST00000454121 251 ntBASIC0.21□□□□□ -2.38
CTSDP07339 TPT1P7-201ENST00000458300 517 ntBASIC0.21□□□□□ -2.38
CTSDP07339 RNU7-138P-201ENST00000459479 64 ntBASIC0.21□□□□□ -2.38
CTSDP07339 SNORD111.1-201ENST00000516421 86 ntBASIC0.21□□□□□ -2.38
CTSDP07339 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
CTSDP07339 RNU1-117P-201ENST00000517041 158 ntBASIC0.21□□□□□ -2.38
CTSDP07339 RNA5SP454-201ENST00000517231 127 ntBASIC0.21□□□□□ -2.38
CTSDP07339 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.21□□□□□ -2.38
CTSDP07339 AP003461.1-201ENST00000528866 78 ntBASIC0.21□□□□□ -2.38
CTSDP07339 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.21□□□□□ -2.38
CTSDP07339 AL022161.1-201ENST00000604390 213 ntBASIC0.21□□□□□ -2.38
CTSDP07339 Z84480.1-201ENST00000605131 311 ntBASIC0.21□□□□□ -2.38
CTSDP07339 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.21□□□□□ -2.38
CTSDP07339 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.21□□□□□ -2.38
CTSDP07339 7SK.10-201ENST00000621414 298 ntBASIC0.21□□□□□ -2.38
CTSDP07339 Y_RNA.796-201ENST00000364268 102 ntBASIC0.2□□□□□ -2.38
CTSDP07339 Y_RNA.799-201ENST00000364992 102 ntBASIC0.2□□□□□ -2.38
CTSDP07339 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CTSDP07339 RNU6-1105P-201ENST00000384774 107 ntBASIC0.2□□□□□ -2.38
CTSDP07339 SNORD73A-201ENST00000386062 65 ntBASIC0.2□□□□□ -2.38
CTSDP07339 RNU2-29P-201ENST00000410423 189 ntBASIC0.2□□□□□ -2.38
CTSDP07339 RNU6-195P-201ENST00000411352 109 ntBASIC0.2□□□□□ -2.38
CTSDP07339 SSR1P2-201ENST00000415208 787 ntBASIC0.2□□□□□ -2.38
CTSDP07339 MTND3P9-201ENST00000429526 346 ntBASIC0.2□□□□□ -2.38
CTSDP07339 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.2□□□□□ -2.38
CTSDP07339 RPL23AP50-201ENST00000434149 455 ntBASIC0.2□□□□□ -2.38
CTSDP07339 AC004854.1-201ENST00000440356 349 ntBASIC0.2□□□□□ -2.38
CTSDP07339 AC104332.1-201ENST00000440471 797 ntBASIC0.2□□□□□ -2.38
CTSDP07339 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.2□□□□□ -2.38
CTSDP07339 U8.21-201ENST00000459536 136 ntBASIC0.2□□□□□ -2.38
CTSDP07339 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.2□□□□□ -2.38
CTSDP07339 Y_RNA.673-201ENST00000516306 88 ntBASIC0.2□□□□□ -2.38
CTSDP07339 RNU6-1110P-201ENST00000516462 101 ntBASIC0.2□□□□□ -2.38
CTSDP07339 RNU6-430P-201ENST00000517078 107 ntBASIC0.2□□□□□ -2.38
CTSDP07339 AL137161.1-201ENST00000532231 390 ntBASIC0.2□□□□□ -2.38
CTSDP07339 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.2□□□□□ -2.38
CTSDP07339 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.2□□□□□ -2.38
CTSDP07339 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.2□□□□□ -2.38
CTSDP07339 FGF7P1-201ENST00000582820 288 ntBASIC0.2□□□□□ -2.38
CTSDP07339 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
CTSDP07339 AC131055.1-201ENST00000584626 316 ntBASIC0.2□□□□□ -2.38
CTSDP07339 AC004223.2-201ENST00000590309 544 ntBASIC0.2□□□□□ -2.38
CTSDP07339 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.2□□□□□ -2.38
CTSDP07339 SNORD11B-201ENST00000607707 90 ntBASIC0.2□□□□□ -2.38
CTSDP07339 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
CTSDP07339 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.2□□□□□ -2.38
CTSDP07339 RNU6-1266P-201ENST00000362794 105 ntBASIC0.19□□□□□ -2.38
CTSDP07339 RNA5SP264-201ENST00000363115 107 ntBASIC0.19□□□□□ -2.38
CTSDP07339 Y_RNA.118-201ENST00000363300 101 ntBASIC0.19□□□□□ -2.38
CTSDP07339 SNORD114-23-201ENST00000363536 72 ntBASIC0.19□□□□□ -2.38
CTSDP07339 Y_RNA.265-201ENST00000364677 108 ntBASIC0.19□□□□□ -2.38
CTSDP07339 Y_RNA.330-201ENST00000365230 109 ntBASIC0.19□□□□□ -2.38
CTSDP07339 RNU6-606P-201ENST00000384721 111 ntBASIC0.19□□□□□ -2.38
CTSDP07339 RNU6-1067P-201ENST00000384752 107 ntBASIC0.19□□□□□ -2.38
CTSDP07339 RNA5SP504-201ENST00000410676 117 ntBASIC0.19□□□□□ -2.38
CTSDP07339 MTCO2P8-201ENST00000412213 658 ntBASIC0.19□□□□□ -2.38
CTSDP07339 MTCO2P34-201ENST00000421994 607 ntBASIC0.19□□□□□ -2.38
CTSDP07339 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.19□□□□□ -2.38
CTSDP07339 AC244098.3-201ENST00000424803 96 ntBASIC0.19□□□□□ -2.38
CTSDP07339 RPL31P35-201ENST00000431058 377 ntBASIC0.19□□□□□ -2.38
CTSDP07339 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.19□□□□□ -2.38
CTSDP07339 AL162725.1-201ENST00000435405 301 ntBASIC0.19□□□□□ -2.38
CTSDP07339 AC093019.1-201ENST00000443135 252 ntBASIC0.19□□□□□ -2.38
CTSDP07339 NDUFB4P10-201ENST00000452541 359 ntBASIC0.19□□□□□ -2.38
CTSDP07339 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.19□□□□□ -2.38
CTSDP07339 AF186996.7-201ENST00000492781 209 ntBASIC0.19□□□□□ -2.38
CTSDP07339 OR9P1P-201ENST00000496431 281 ntBASIC0.19□□□□□ -2.38
CTSDP07339 RNU7-12P-201ENST00000516030 62 ntBASIC0.19□□□□□ -2.38
CTSDP07339 RNU6-311P-201ENST00000516224 102 ntBASIC0.19□□□□□ -2.38
CTSDP07339 RNU7-28P-201ENST00000516759 62 ntBASIC0.19□□□□□ -2.38
CTSDP07339 MTND4LP26-201ENST00000518144 282 ntBASIC0.19□□□□□ -2.38
CTSDP07339 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
CTSDP07339 AC109810.1-201ENST00000534066 224 ntBASIC0.19□□□□□ -2.38
CTSDP07339 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.19□□□□□ -2.38
CTSDP07339 RMST_3.1-201ENST00000611651 109 ntBASIC0.19□□□□□ -2.38
CTSDP07339 AL136317.1-201ENST00000612653 226 ntBASIC0.19□□□□□ -2.38
CTSDP07339 AC137590.2-201ENST00000619709 240 ntBASIC0.19□□□□□ -2.38
CTSDP07339 ZNF204P-201ENST00000416749 2397 ntBASIC0.19□□□□□ -2.38
CTSDP07339 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
CTSDP07339 Y_RNA.123-201ENST00000363338 102 ntBASIC0.18□□□□□ -2.38
CTSDP07339 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
CTSDP07339 MIR216A-201ENST00000385063 110 ntBASIC0.18□□□□□ -2.38
CTSDP07339 MIR1185-2-201ENST00000408687 86 ntBASIC0.18□□□□□ -2.38
CTSDP07339 MTCO1P19-201ENST00000443487 500 ntBASIC0.18□□□□□ -2.38
CTSDP07339 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.18□□□□□ -2.38
CTSDP07339 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.18□□□□□ -2.38
CTSDP07339 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms