Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
MMP1P03956 MIR548F5-201ENST00000408421 86 ntBASIC1.44□□□□□ -2.18
MMP1P03956 RNA5SP494-201ENST00000410653 129 ntBASIC1.44□□□□□ -2.18
MMP1P03956 AC004866.1-201ENST00000411748 78 ntBASIC1.44□□□□□ -2.18
MMP1P03956 AL353572.1-201ENST00000442490 417 ntBASIC1.44□□□□□ -2.18
MMP1P03956 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.44□□□□□ -2.18
MMP1P03956 AC087477.1-201ENST00000465747 340 ntBASIC1.44□□□□□ -2.18
MMP1P03956 Y_RNA.670-201ENST00000516255 105 ntBASIC1.44□□□□□ -2.18
MMP1P03956 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.44□□□□□ -2.18
MMP1P03956 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.44□□□□□ -2.18
MMP1P03956 MIR4790-201ENST00000577799 79 ntBASIC1.44□□□□□ -2.18
MMP1P03956 MIR5696-201ENST00000578474 85 ntBASIC1.44□□□□□ -2.18
MMP1P03956 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
MMP1P03956 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.44□□□□□ -2.18
MMP1P03956 SCARNA4-201ENST00000629045 128 ntBASIC1.44□□□□□ -2.18
MMP1P03956 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.44□□□□□ -2.18
MMP1P03956 MTND5P9-201ENST00000503854 1755 ntBASIC1.44□□□□□ -2.18
MMP1P03956 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
MMP1P03956 RNU6-845P-201ENST00000362578 103 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RNY1-201ENST00000364228 113 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RNU1-93P-201ENST00000364704 169 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RNU6-596P-201ENST00000365395 98 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RNU6-438P-201ENST00000365561 103 ntBASIC1.43□□□□□ -2.18
MMP1P03956 SNORA18.2-201ENST00000383865 132 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RNU6-338P-201ENST00000383888 105 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RNU6-767P-201ENST00000384132 107 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RNU6-876P-201ENST00000391295 104 ntBASIC1.43□□□□□ -2.18
MMP1P03956 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.43□□□□□ -2.18
MMP1P03956 SNRPEP8-201ENST00000442866 260 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RPS4XP11-201ENST00000446897 772 ntBASIC1.43□□□□□ -2.18
MMP1P03956 OR2AQ1P-201ENST00000451972 200 ntBASIC1.43□□□□□ -2.18
MMP1P03956 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.43□□□□□ -2.18
MMP1P03956 SNORD5.1-201ENST00000458800 75 ntBASIC1.43□□□□□ -2.18
MMP1P03956 AC026782.1-201ENST00000512952 449 ntBASIC1.43□□□□□ -2.18
MMP1P03956 RNU7-30P-201ENST00000516835 62 ntBASIC1.43□□□□□ -2.18
MMP1P03956 SNORA31.17-201ENST00000516953 127 ntBASIC1.43□□□□□ -2.18
MMP1P03956 AC090517.1-201ENST00000569307 266 ntBASIC1.43□□□□□ -2.18
MMP1P03956 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.43□□□□□ -2.18
MMP1P03956 MIR6128-201ENST00000615528 109 ntBASIC1.43□□□□□ -2.18
MMP1P03956 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.43□□□□□ -2.18
MMP1P03956 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
MMP1P03956 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
MMP1P03956 Y_RNA.533-201ENST00000384596 114 ntBASIC1.42□□□□□ -2.18
MMP1P03956 MIR613-201ENST00000385248 95 ntBASIC1.42□□□□□ -2.18
MMP1P03956 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
MMP1P03956 AC138393.2-201ENST00000414742 246 ntBASIC1.42□□□□□ -2.18
MMP1P03956 RPL21P111-201ENST00000418453 477 ntBASIC1.42□□□□□ -2.18
MMP1P03956 AC243428.1-201ENST00000421099 264 ntBASIC1.42□□□□□ -2.18
MMP1P03956 AC139712.2-201ENST00000424302 339 ntBASIC1.42□□□□□ -2.18
MMP1P03956 AC007215.1-201ENST00000464893 276 ntBASIC1.42□□□□□ -2.18
MMP1P03956 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.42□□□□□ -2.18
MMP1P03956 AC046134.1-201ENST00000514454 666 ntBASIC1.42□□□□□ -2.18
MMP1P03956 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.42□□□□□ -2.18
MMP1P03956 ACA59.1-201ENST00000515966 143 ntBASIC1.42□□□□□ -2.18
MMP1P03956 RNA5SP480-201ENST00000516840 109 ntBASIC1.42□□□□□ -2.18
MMP1P03956 SNORA20.3-201ENST00000516880 132 ntBASIC1.42□□□□□ -2.18
MMP1P03956 AC090821.2-201ENST00000523552 176 ntBASIC1.42□□□□□ -2.18
MMP1P03956 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.42□□□□□ -2.18
MMP1P03956 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.42□□□□□ -2.18
MMP1P03956 RPL17P51-201ENST00000605218 238 ntBASIC1.42□□□□□ -2.18
MMP1P03956 AC022709.1-201ENST00000615967 87 ntBASIC1.42□□□□□ -2.18
MMP1P03956 AC022306.2-201ENST00000617563 647 ntBASIC1.42□□□□□ -2.18
MMP1P03956 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.42□□□□□ -2.18
MMP1P03956 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.42□□□□□ -2.18
MMP1P03956 AC099654.14-201ENST00000638599 341 ntBASIC1.42□□□□□ -2.18
MMP1P03956 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
MMP1P03956 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.42□□□□□ -2.18
MMP1P03956 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.42□□□□□ -2.18
MMP1P03956 MIR126-201ENST00000362291 85 ntBASIC1.41□□□□□ -2.18
MMP1P03956 RNU6-112P-201ENST00000363599 104 ntBASIC1.41□□□□□ -2.18
MMP1P03956 Y_RNA.166-201ENST00000363730 102 ntBASIC1.41□□□□□ -2.18
MMP1P03956 SNORD31B-201ENST00000364977 69 ntBASIC1.41□□□□□ -2.18
MMP1P03956 RNU6-439P-201ENST00000384188 106 ntBASIC1.41□□□□□ -2.18
MMP1P03956 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
MMP1P03956 RNU4-14P-201ENST00000410858 122 ntBASIC1.41□□□□□ -2.18
MMP1P03956 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.41□□□□□ -2.18
MMP1P03956 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.41□□□□□ -2.18
MMP1P03956 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.41□□□□□ -2.18
MMP1P03956 AC015922.2-201ENST00000435593 184 ntBASIC1.41□□□□□ -2.18
MMP1P03956 RPS3AP52-201ENST00000435639 297 ntBASIC1.41□□□□□ -2.18
MMP1P03956 AC016925.1-201ENST00000458303 298 ntBASIC1.41□□□□□ -2.18
MMP1P03956 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
MMP1P03956 RPL30P10-201ENST00000488148 337 ntBASIC1.41□□□□□ -2.18
MMP1P03956 AC103851.1-201ENST00000506833 274 ntBASIC1.41□□□□□ -2.18
MMP1P03956 AC097473.1-201ENST00000508142 408 ntBASIC1.41□□□□□ -2.18
MMP1P03956 Y_RNA.691-201ENST00000516611 103 ntBASIC1.41□□□□□ -2.18
MMP1P03956 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.41□□□□□ -2.18
MMP1P03956 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.41□□□□□ -2.18
MMP1P03956 AC018462.2-201ENST00000605375 395 ntBASIC1.41□□□□□ -2.18
MMP1P03956 MIR8074-201ENST00000615081 81 ntBASIC1.41□□□□□ -2.18
MMP1P03956 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.41□□□□□ -2.18
MMP1P03956 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.41□□□□□ -2.18
MMP1P03956 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
MMP1P03956 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
MMP1P03956 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
MMP1P03956 Y_RNA.48-201ENST00000362710 103 ntBASIC1.4□□□□□ -2.19
MMP1P03956 Y_RNA.88-201ENST00000363029 99 ntBASIC1.4□□□□□ -2.19
MMP1P03956 Y_RNA.303-201ENST00000364998 94 ntBASIC1.4□□□□□ -2.19
MMP1P03956 SNORD81.2-201ENST00000365153 76 ntBASIC1.4□□□□□ -2.19
MMP1P03956 AC074085.1-201ENST00000413598 418 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms