Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 SNORD2.1-201ENST00000458762 69 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 RPL26P26-201ENST00000480251 434 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 RNU6-1219P-201ENST00000516143 112 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 RNU6-313P-201ENST00000516317 112 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 SNORA43.2-201ENST00000516652 128 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 SNORA31.20-201ENST00000517111 133 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 RPL21P9-201ENST00000556149 474 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 MED28P6-201ENST00000558776 231 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 LINC00933-203ENST00000559812 219 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.79□□□□□ -1.96
COL3A1P02461 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.79□□□□□ -1.96
COL3A1P02461 AL138963.2-201ENST00000605137 226 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 MIR6132-201ENST00000622083 109 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL3A1P02461 ADAM3A-203ENST00000461344 2157 ntBASIC2.79□□□□□ -1.96
COL3A1P02461 Y_RNA.331-201ENST00000365267 102 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 SNORA29-201ENST00000384183 140 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 RNU6-1145P-201ENST00000384246 107 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 RNU6-1154P-201ENST00000391001 104 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.78□□□□□ -1.96
COL3A1P02461 RPL27AP8-201ENST00000424277 446 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.78□□□□□ -1.96
COL3A1P02461 SSXP4-201ENST00000451349 245 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 SNORA40.9-201ENST00000515895 93 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 AP004371.1-201ENST00000525240 214 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 AC016256.1-201ENST00000547971 354 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.78□□□□□ -1.96
COL3A1P02461 AC024581.2-201ENST00000619986 252 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 AC091895.1-201ENST00000624494 256 ntBASIC2.78□□□□□ -1.96
COL3A1P02461 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
COL3A1P02461 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
COL3A1P02461 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL3A1P02461 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.96
COL3A1P02461 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
COL3A1P02461 RNA5SP361-201ENST00000362686 118 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 SNORA11.4-201ENST00000408823 129 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 Y_RNA.597-201ENST00000410463 100 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AC243964.1-201ENST00000441814 261 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.77□□□□□ -1.97
COL3A1P02461 UQCRBP2-201ENST00000447827 297 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.77□□□□□ -1.97
COL3A1P02461 AC074133.1-201ENST00000515696 183 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 RNU6-567P-201ENST00000516746 107 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.77□□□□□ -1.97
COL3A1P02461 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.77□□□□□ -1.97
COL3A1P02461 MIR4308-201ENST00000580634 81 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
COL3A1P02461 AP001486.2-201ENST00000561652 5113 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL3A1P02461 RNU6-961P-201ENST00000363893 105 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 RNU6-312P-201ENST00000364629 107 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 Y_RNA.319-201ENST00000365138 92 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 MIR10B-201ENST00000385011 110 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 MIR329-1-201ENST00000385028 80 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 SNRPEP9-201ENST00000436794 238 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AC104435.1-201ENST00000483483 166 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AF186996.7-201ENST00000492781 209 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.77□□□□□ -1.97
COL3A1P02461 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.77□□□□□ -1.97
COL3A1P02461 RN7SKP282-201ENST00000516824 299 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AP004607.1-201ENST00000524456 203 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AL391261.3-201ENST00000557194 520 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 MIR5695-201ENST00000579717 85 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.77□□□□□ -1.97
COL3A1P02461 AC005176.2-201ENST00000596933 147 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 AC090132.2-201ENST00000615881 347 ntBASIC2.77□□□□□ -1.97
COL3A1P02461 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL3A1P02461 ZNF271P-202ENST00000465539 1970 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 RNU6-449P-201ENST00000383914 107 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 Y_RNA.400-201ENST00000383963 111 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 Y_RNA.488-201ENST00000384403 102 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 RNU6-1168P-201ENST00000390831 104 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 RNU6-159P-201ENST00000391080 106 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 SNORA26.7-201ENST00000391288 122 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 Y_RNA.595-201ENST00000410403 105 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 RNU6-735P-201ENST00000410612 107 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 AL358075.3-201ENST00000426289 226 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
COL3A1P02461 AC009237.8-201ENST00000445492 379 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.76□□□□□ -1.97
COL3A1P02461 MRPS10P1-201ENST00000448483 130 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 SNORA31.8-201ENST00000516327 108 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 RNU6-58P-201ENST00000517143 103 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 TRAV28-201ENST00000557548 323 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 ZNF192P1-203ENST00000565888 810 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 MIR5692C2-201ENST00000577959 77 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 AC006065.5-201ENST00000623427 349 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 AC002543.1-201ENST00000299783 1954 ntBASIC2.76□□□□□ -1.97
COL3A1P02461 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL3A1P02461 ZNF204P-201ENST00000416749 2397 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
COL3A1P02461 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
COL3A1P02461 RNU5F-3P-201ENST00000363767 117 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 RNU4-56P-201ENST00000364700 142 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 Y_RNA.357-201ENST00000365487 109 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 SNORD116-18-201ENST00000383961 92 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 RNU6-1181P-201ENST00000384191 106 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 TRIAP1P1-201ENST00000427062 225 ntBASIC2.75□□□□□ -1.97
COL3A1P02461 AC005042.3-201ENST00000453230 174 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms