Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
HLA-DRAP01903 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.3□□□□□ -2.36
HLA-DRAP01903 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
HLA-DRAP01903 AC134026.1-201ENST00000623249 2239 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 SNORD89-201ENST00000390981 114 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 U8.21-201ENST00000459536 136 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 RPS29P27-201ENST00000463711 170 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.29□□□□□ -2.36
HLA-DRAP01903 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 RNU1-117P-201ENST00000517041 158 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 AC022868.1-201ENST00000517767 391 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.29□□□□□ -2.36
HLA-DRAP01903 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.29□□□□□ -2.36
HLA-DRAP01903 FGF7P1-201ENST00000582820 288 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 AC234772.3-201ENST00000602277 528 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
HLA-DRAP01903 SCARNA4-201ENST00000629045 128 ntBASIC0.29□□□□□ -2.36
HLA-DRAP01903 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
HLA-DRAP01903 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 RNU6-1335P-201ENST00000365426 107 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 RNU6-606P-201ENST00000384721 111 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 SSR1P2-201ENST00000415208 787 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.28□□□□□ -2.36
HLA-DRAP01903 AC004854.1-201ENST00000440356 349 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 RPS20P10-201ENST00000451209 253 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.28□□□□□ -2.36
HLA-DRAP01903 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.28□□□□□ -2.36
HLA-DRAP01903 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 RN7SKP12-201ENST00000516275 143 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 SNORD111.1-201ENST00000516421 86 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 RNU6-1110P-201ENST00000516462 101 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 RNU7-28P-201ENST00000516759 62 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
HLA-DRAP01903 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.28□□□□□ -2.36
HLA-DRAP01903 AL136317.1-201ENST00000612653 226 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 AC139792.3-201ENST00000623525 224 ntBASIC0.28□□□□□ -2.36
HLA-DRAP01903 Y_RNA.265-201ENST00000364677 108 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
HLA-DRAP01903 RNU6-793P-201ENST00000384233 104 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 RNU6-1067P-201ENST00000384752 107 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 RNA5SP504-201ENST00000410676 117 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 MTND3P9-201ENST00000429526 346 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 CALM2P4-201ENST00000430810 426 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 AC009961.2-201ENST00000435771 251 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 AC093019.1-201ENST00000443135 252 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 TPT1P7-201ENST00000458300 517 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 AC092989.1-201ENST00000481235 277 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 MTND2P14-201ENST00000482139 351 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 RPL39P5-202ENST00000512505 151 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.27□□□□□ -2.37
HLA-DRAP01903 RNU6-430P-201ENST00000517078 107 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 RNA5SP454-201ENST00000517231 127 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 AL137161.1-201ENST00000532231 390 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 MRPS36P4-201ENST00000534436 298 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.27□□□□□ -2.37
HLA-DRAP01903 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.27□□□□□ -2.37
HLA-DRAP01903 AC004223.2-201ENST00000590309 544 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 AL022161.1-201ENST00000604390 213 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 7SK.10-201ENST00000621414 298 ntBASIC0.27□□□□□ -2.37
HLA-DRAP01903 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
HLA-DRAP01903 MIR562-201ENST00000384894 95 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 RNU1-119P-201ENST00000391122 165 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 MTCO2P8-201ENST00000412213 658 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.26□□□□□ -2.37
HLA-DRAP01903 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.26□□□□□ -2.37
HLA-DRAP01903 RPL31P35-201ENST00000431058 377 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 RPL23AP50-201ENST00000434149 455 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.26□□□□□ -2.37
HLA-DRAP01903 NDUFB4P10-201ENST00000452541 359 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.26□□□□□ -2.37
HLA-DRAP01903 AC067940.1-201ENST00000458411 300 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.26□□□□□ -2.37
HLA-DRAP01903 RNU7-12P-201ENST00000516030 62 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 AL096861.1-201ENST00000610899 123 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 AC010608.3-201ENST00000625048 527 ntBASIC0.26□□□□□ -2.37
HLA-DRAP01903 ZNF204P-201ENST00000416749 2397 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 Y_RNA.330-201ENST00000365230 109 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 RNU6-245P-201ENST00000384020 107 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 RNU6-342P-201ENST00000384521 104 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 SNORD73A-201ENST00000386062 65 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 U8.16-201ENST00000391279 133 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 RNA5SP511-201ENST00000410487 115 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 RNU6-195P-201ENST00000411352 109 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 Z99497.1-201ENST00000421282 135 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.25□□□□□ -2.37
HLA-DRAP01903 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.25□□□□□ -2.37
HLA-DRAP01903 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.25□□□□□ -2.37
HLA-DRAP01903 OR9P1P-201ENST00000496431 281 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 RNA5SP54-201ENST00000516951 92 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.25□□□□□ -2.37
HLA-DRAP01903 MTND1P8-201ENST00000571424 950 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 AC010620.1-201ENST00000601088 1102 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 AC245014.2-201ENST00000603689 287 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 AC246785.4-201ENST00000605374 287 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 AC007742.2-201ENST00000618226 398 ntBASIC0.25□□□□□ -2.37
HLA-DRAP01903 RNA5SP264-201ENST00000363115 107 ntBASIC0.24□□□□□ -2.37
HLA-DRAP01903 Y_RNA.123-201ENST00000363338 102 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms