Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MIR7107-201ENST00000611489 80 ntBASIC-0.49□□□□□ -2.49
TNFP01375 MIRLET7C-201ENST00000362160 84 ntBASIC-0.5□□□□□ -2.49
TNFP01375 MIR101-1-201ENST00000362265 75 ntBASIC-0.5□□□□□ -2.49
TNFP01375 RNU6-562P-201ENST00000362731 107 ntBASIC-0.5□□□□□ -2.49
TNFP01375 RNU4-73P-201ENST00000363164 141 ntBASIC-0.5□□□□□ -2.49
TNFP01375 RNU6-511P-201ENST00000363496 107 ntBASIC-0.5□□□□□ -2.49
TNFP01375 RNU4-84P-201ENST00000364200 139 ntBASIC-0.5□□□□□ -2.49
TNFP01375 RNU5E-7P-201ENST00000365290 117 ntBASIC-0.5□□□□□ -2.49
TNFP01375 RNU6-269P-201ENST00000391077 97 ntBASIC-0.5□□□□□ -2.49
TNFP01375 MIR1253-201ENST00000408273 105 ntBASIC-0.5□□□□□ -2.49
TNFP01375 AL953862.1-201ENST00000423016 168 ntBASIC-0.5□□□□□ -2.49
TNFP01375 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.5□□□□□ -2.49
TNFP01375 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.5□□□□□ -2.49
TNFP01375 AC013470.1-201ENST00000453438 462 ntBASIC-0.5□□□□□ -2.49
TNFP01375 AC010424.1-201ENST00000506336 297 ntBASIC-0.5□□□□□ -2.49
TNFP01375 AC010468.3-201ENST00000508225 458 ntBASIC-0.5□□□□□ -2.49
TNFP01375 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.5□□□□□ -2.49
TNFP01375 RN7SKP287-201ENST00000516546 266 ntBASIC-0.5□□□□□ -2.49
TNFP01375 SNORA18.7-201ENST00000516910 131 ntBASIC-0.5□□□□□ -2.49
TNFP01375 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.5□□□□□ -2.49
TNFP01375 MIR4752-201ENST00000579672 72 ntBASIC-0.5□□□□□ -2.49
TNFP01375 MIR3925-201ENST00000584674 77 ntBASIC-0.5□□□□□ -2.49
TNFP01375 MIR4753-201ENST00000585119 83 ntBASIC-0.5□□□□□ -2.49
TNFP01375 AL445435.1-201ENST00000604232 665 ntBASIC-0.5□□□□□ -2.49
TNFP01375 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-0.5□□□□□ -2.49
TNFP01375 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.5□□□□□ -2.49
TNFP01375 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.51□□□□□ -2.49
TNFP01375 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.51□□□□□ -2.49
TNFP01375 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.51□□□□□ -2.49
TNFP01375 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MIR604-201ENST00000384880 94 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MIR563-201ENST00000385080 79 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MIR454-201ENST00000390180 115 ntBASIC-0.51□□□□□ -2.49
TNFP01375 AL049545.1-201ENST00000401856 572 ntBASIC-0.51□□□□□ -2.49
TNFP01375 RNA5SP163-201ENST00000410304 99 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MTCO1P17-201ENST00000411522 491 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MTCO2P8-201ENST00000412213 658 ntBASIC-0.51□□□□□ -2.49
TNFP01375 AC106883.1-201ENST00000418805 562 ntBASIC-0.51□□□□□ -2.49
TNFP01375 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.51□□□□□ -2.49
TNFP01375 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.51□□□□□ -2.49
TNFP01375 AC078809.1-201ENST00000427601 140 ntBASIC-0.51□□□□□ -2.49
TNFP01375 AC114878.1-201ENST00000441166 358 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MTATP6P26-201ENST00000445926 662 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MTCO1P27-201ENST00000448269 226 ntBASIC-0.51□□□□□ -2.49
TNFP01375 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.51□□□□□ -2.49
TNFP01375 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
TNFP01375 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC-0.51□□□□□ -2.49
TNFP01375 AC090617.3-201ENST00000573670 475 ntBASIC-0.51□□□□□ -2.49
TNFP01375 AC008608.1-201ENST00000603910 127 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MIR3666-201ENST00000607845 111 ntBASIC-0.51□□□□□ -2.49
TNFP01375 FAM157A-202ENST00000615155 405 ntBASIC-0.51□□□□□ -2.49
TNFP01375 MIR4788-201ENST00000639104 80 ntBASIC-0.51□□□□□ -2.49
TNFP01375 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.51□□□□□ -2.49
TNFP01375 RNA5SP205-201ENST00000364653 136 ntBASIC-0.52□□□□□ -2.49
TNFP01375 SNORA36A-201ENST00000384221 132 ntBASIC-0.52□□□□□ -2.49
TNFP01375 MIR501-201ENST00000390204 84 ntBASIC-0.52□□□□□ -2.49
TNFP01375 MIR760-201ENST00000390220 80 ntBASIC-0.52□□□□□ -2.49
TNFP01375 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.52□□□□□ -2.49
TNFP01375 FCF1P9-201ENST00000412546 282 ntBASIC-0.52□□□□□ -2.49
TNFP01375 AC244250.2-201ENST00000418731 148 ntBASIC-0.52□□□□□ -2.49
TNFP01375 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.52□□□□□ -2.49
TNFP01375 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.52□□□□□ -2.49
TNFP01375 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.52□□□□□ -2.49
TNFP01375 AC104692.1-201ENST00000472406 90 ntBASIC-0.52□□□□□ -2.49
TNFP01375 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.52□□□□□ -2.49
TNFP01375 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.52□□□□□ -2.49
TNFP01375 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.52□□□□□ -2.49
TNFP01375 MIR4493-201ENST00000584016 73 ntBASIC-0.52□□□□□ -2.49
TNFP01375 AC087685.1-201ENST00000587507 141 ntBASIC-0.52□□□□□ -2.49
TNFP01375 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
TNFP01375 AL008636.1-201ENST00000625038 1018 ntBASIC-0.52□□□□□ -2.49
TNFP01375 snoZ40.1-201ENST00000364540 72 ntBASIC-0.53□□□□□ -2.49
TNFP01375 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.53□□□□□ -2.49
TNFP01375 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.53□□□□□ -2.49
TNFP01375 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.53□□□□□ -2.49
TNFP01375 SNORA2B-201ENST00000384583 137 ntBASIC-0.53□□□□□ -2.49
TNFP01375 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
TNFP01375 RPS26P42-201ENST00000413485 326 ntBASIC-0.53□□□□□ -2.49
TNFP01375 CALM2P2-201ENST00000428512 440 ntBASIC-0.53□□□□□ -2.49
TNFP01375 AL133396.1-201ENST00000432048 687 ntBASIC-0.53□□□□□ -2.49
TNFP01375 RPL23AP30-201ENST00000432419 501 ntBASIC-0.53□□□□□ -2.49
TNFP01375 RPL39P34-201ENST00000477141 156 ntBASIC-0.53□□□□□ -2.49
TNFP01375 RNU7-12P-201ENST00000516030 62 ntBASIC-0.53□□□□□ -2.49
TNFP01375 RNU7-129P-201ENST00000516128 62 ntBASIC-0.53□□□□□ -2.49
TNFP01375 RNU6-1102P-201ENST00000516149 96 ntBASIC-0.53□□□□□ -2.49
TNFP01375 SCARNA17-201ENST00000516183 144 ntBASIC-0.53□□□□□ -2.49
TNFP01375 RNU6-758P-201ENST00000516292 89 ntBASIC-0.53□□□□□ -2.49
TNFP01375 AC025647.1-201ENST00000517879 253 ntBASIC-0.53□□□□□ -2.49
TNFP01375 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC-0.53□□□□□ -2.49
TNFP01375 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.53□□□□□ -2.49
TNFP01375 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.53□□□□□ -2.49
TNFP01375 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.53□□□□□ -2.49
TNFP01375 AC069545.1-201ENST00000605671 358 ntBASIC-0.53□□□□□ -2.49
TNFP01375 SNORA28-201ENST00000606769 126 ntBASIC-0.53□□□□□ -2.49
TNFP01375 AC063944.3-201ENST00000609969 533 ntBASIC-0.53□□□□□ -2.49
TNFP01375 uc_338.16-201ENST00000621804 95 ntBASIC-0.53□□□□□ -2.49
TNFP01375 AL359697.1-201ENST00000624879 587 ntBASIC-0.53□□□□□ -2.49
TNFP01375 RNU6-552P-201ENST00000362869 119 ntBASIC-0.54□□□□□ -2.5
TNFP01375 U3.4-201ENST00000363352 213 ntBASIC-0.54□□□□□ -2.5
TNFP01375 RNU6-371P-201ENST00000364283 108 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms