Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.92□□□□□ -2.1
CLDN1O95832 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLDN1O95832 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.92□□□□□ -2.1
CLDN1O95832 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
CLDN1O95832 RNU1-62P-201ENST00000362599 164 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 SNORA18.2-201ENST00000383865 132 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 RNU6-26P-201ENST00000383985 107 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 RNU6-318P-201ENST00000384283 103 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 RNU6-541P-201ENST00000384709 110 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 MIR583-201ENST00000384846 75 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 MIR1294-201ENST00000408503 142 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 AC114482.1-201ENST00000418010 247 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 WARS2P1-201ENST00000429678 537 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 IPO7P1-201ENST00000442031 636 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.91□□□□□ -2.1
CLDN1O95832 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.91□□□□□ -2.1
CLDN1O95832 MTCO3P8-201ENST00000453691 755 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 RNU7-87P-201ENST00000459343 62 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 SCARNA15.1-201ENST00000516384 125 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 AC007336.1-201ENST00000576365 3828 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 AL355297.2-201ENST00000604792 129 ntBASIC1.91□□□□□ -2.1
CLDN1O95832 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.91□□□□□ -2.1
CLDN1O95832 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.1
CLDN1O95832 AL596028.1-201ENST00000326971 197 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 Y_RNA.27-201ENST00000362540 103 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 Y_RNA.116-201ENST00000363292 103 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 Y_RNA.122-201ENST00000363331 96 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 SNORA25.9-201ENST00000365087 128 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RNU6-234P-201ENST00000365229 104 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RNU6-546P-201ENST00000383991 107 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 Y_RNA.422-201ENST00000384054 114 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RNU6-1145P-201ENST00000384246 107 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 SNORA67.2-201ENST00000384300 149 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 MIR329-1-201ENST00000385028 80 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 MIR518E-201ENST00000385252 88 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 MIR549A-201ENST00000385268 96 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AL590004.1-201ENST00000405321 300 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 MIR320B2-201ENST00000408479 138 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RNU2-2P-201ENST00000410396 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 Y_RNA.605-201ENST00000410577 105 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RNA5SP504-201ENST00000410676 117 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RNU2-32P-201ENST00000411193 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RNU6-1001P-201ENST00000411265 100 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN1O95832 MTCO3P19-201ENST00000415864 321 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AC027124.2-201ENST00000428249 105 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AC096644.2-201ENST00000429278 159 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AL160004.2-201ENST00000432935 350 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AC004386.2-201ENST00000441858 148 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RN7SKP49-201ENST00000516675 260 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.9□□□□□ -2.11
CLDN1O95832 AC093023.1-201ENST00000547375 507 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
CLDN1O95832 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.9□□□□□ -2.11
CLDN1O95832 MIR5695-201ENST00000579717 85 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 MIR4680-201ENST00000580906 66 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.15-201ENST00000611544 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.16-201ENST00000613119 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.12-201ENST00000613778 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.20-201ENST00000613956 192 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.9-201ENST00000615427 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.11-201ENST00000616345 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.2-201ENST00000616535 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.3-201ENST00000617785 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.19-201ENST00000618602 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 RNU2-1-201ENST00000618664 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.6-201ENST00000619225 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.5-201ENST00000619465 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 U2.10-201ENST00000620268 191 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 AC012640.5-201ENST00000623897 319 ntBASIC1.9□□□□□ -2.11
CLDN1O95832 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
CLDN1O95832 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CLDN1O95832 RNA5SP361-201ENST00000362686 118 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 SNORA25B-201ENST00000365507 128 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 RNU6-611P-201ENST00000384276 104 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 RNU6-1160P-201ENST00000384546 104 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 MIR561-201ENST00000385216 97 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 MIR628-201ENST00000385229 95 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.89□□□□□ -2.11
CLDN1O95832 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN1O95832 RNU7-169P-201ENST00000459456 61 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 AC091179.3-201ENST00000474761 144 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 AC005840.1-201ENST00000498412 377 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.89□□□□□ -2.11
CLDN1O95832 ATP5EP1-201ENST00000510257 156 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 SNORA25.14-201ENST00000516481 132 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 SCARNA16.3-201ENST00000516595 184 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 RNU6-1098P-201ENST00000516772 96 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 AC022868.1-201ENST00000517767 391 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 NDUFA5P6-201ENST00000542110 379 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 AC104695.3-201ENST00000604052 296 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 AC040896.1-201ENST00000613819 479 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 AC005296.1-201ENST00000616145 209 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 MIR6766-201ENST00000622641 72 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 MIR1248-201ENST00000629190 106 ntBASIC1.89□□□□□ -2.11
CLDN1O95832 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLDN1O95832 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms