Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 U6.104-201ENST00000637979 90 ntBASIC3.3□□□□□ -1.88
RAPGEF3O95398 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RAPGEF3O95398 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RAPGEF3O95398 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RAPGEF3O95398 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.29□□□□□ -1.88
RAPGEF3O95398 Y_RNA.193-201ENST00000363979 102 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 SNORD32B-201ENST00000364460 84 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 RNU6-702P-201ENST00000364982 107 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 Y_RNA.401-201ENST00000383965 117 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.29□□□□□ -1.88
RAPGEF3O95398 AL445305.1-201ENST00000432577 575 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.29□□□□□ -1.88
RAPGEF3O95398 PCNPP5-201ENST00000452246 481 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 AC025465.3-201ENST00000510570 311 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 AC074133.1-201ENST00000515696 183 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 AC090517.3-201ENST00000625170 141 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 MTND5P35-201ENST00000557537 1720 ntBASIC3.29□□□□□ -1.88
RAPGEF3O95398 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RAPGEF3O95398 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RAPGEF3O95398 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RAPGEF3O95398 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RAPGEF3O95398 RNU1-72P-201ENST00000362976 153 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 Y_RNA.462-201ENST00000384268 102 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 MIR218-1-201ENST00000384999 110 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 RNA5SP492-201ENST00000411330 114 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 CBX3P6-201ENST00000430257 527 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.28□□□□□ -1.88
RAPGEF3O95398 AC244505.4-201ENST00000434905 287 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.28□□□□□ -1.88
RAPGEF3O95398 SSXP5-201ENST00000443473 287 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 RN7SL297P-201ENST00000483161 293 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 RNU6-344P-201ENST00000516635 111 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 RNU6-586P-201ENST00000517265 104 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 AC007536.1-201ENST00000533382 349 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 AL713866.2-201ENST00000603579 219 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 MIR5739-201ENST00000619803 80 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 LINC02555-201ENST00000563933 1951 ntBASIC3.28□□□□□ -1.88
RAPGEF3O95398 MIR337-201ENST00000362281 93 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 RNU6-574P-201ENST00000384265 107 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 AC027124.2-201ENST00000428249 105 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 AC004386.2-201ENST00000441858 148 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.27□□□□□ -1.89
RAPGEF3O95398 LINC01399-202ENST00000458450 244 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 AC023141.11-201ENST00000508864 202 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 SNORA40.9-201ENST00000515895 93 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 RNA5SP200-201ENST00000516360 103 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.27□□□□□ -1.89
RAPGEF3O95398 AC233702.2-202ENST00000562547 291 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 WWP1P1-201ENST00000466609 2769 ntBASIC3.27□□□□□ -1.89
RAPGEF3O95398 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
RAPGEF3O95398 RNU6-926P-201ENST00000384075 107 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 SNORD63-201ENST00000384262 68 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 Y_RNA.597-201ENST00000410463 100 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 RNA5SP344-201ENST00000411081 104 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.26□□□□□ -1.89
RAPGEF3O95398 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.26□□□□□ -1.89
RAPGEF3O95398 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.26□□□□□ -1.89
RAPGEF3O95398 AC009237.7-201ENST00000447357 229 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 CYP2C59P-201ENST00000457790 269 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 AC091179.3-201ENST00000474761 144 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 RPL26P26-201ENST00000480251 434 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.26□□□□□ -1.89
RAPGEF3O95398 AC023824.2-201ENST00000566185 400 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 MZT1P2-201ENST00000604387 248 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 AC011476.5-201ENST00000615594 130 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 Z82209.1-201ENST00000422141 2135 ntBASIC3.26□□□□□ -1.89
RAPGEF3O95398 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAPGEF3O95398 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RAPGEF3O95398 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.25□□□□□ -1.89
RAPGEF3O95398 MIR378A-201ENST00000362177 66 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 Y_RNA.116-201ENST00000363292 103 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 SNORA51.4-201ENST00000364993 124 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 U8.9-201ENST00000365667 134 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 SNORA18.2-201ENST00000383865 132 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 MIR583-201ENST00000384846 75 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 MIR518E-201ENST00000385252 88 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 MIR549A-201ENST00000385268 96 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 SNORD115-46-201ENST00000390982 71 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 MIR1302-6-201ENST00000408466 90 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 BTF3P4-201ENST00000418852 495 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 AP003733.2-201ENST00000529409 171 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 AC018630.3-201ENST00000542637 96 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.25□□□□□ -1.89
RAPGEF3O95398 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.25□□□□□ -1.89
RAPGEF3O95398 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 MIR376A1-201ENST00000616574 68 ntBASIC3.25□□□□□ -1.89
RAPGEF3O95398 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.25□□□□□ -1.89
RAPGEF3O95398 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RAPGEF3O95398 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.25□□□□□ -1.89
RAPGEF3O95398 AC131280.1-202ENST00000624067 4211 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 Y_RNA.64-201ENST00000362845 102 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 Y_RNA.143-201ENST00000363520 106 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 RNU6-457P-201ENST00000363999 107 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 RNU6-26P-201ENST00000383985 107 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 Y_RNA.512-201ENST00000384518 102 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 RNU6-1274P-201ENST00000384557 107 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 SNORA12-201ENST00000391162 147 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 SNORA26.7-201ENST00000391288 122 ntBASIC3.24□□□□□ -1.89
RAPGEF3O95398 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms