Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SNORA40.14-201ENST00000516543 86 ntBASIC2□□□□□ -2.09
NKX2-2O95096 AC025647.1-201ENST00000517879 253 ntBASIC2□□□□□ -2.09
NKX2-2O95096 SUMO2P18-201ENST00000518873 252 ntBASIC2□□□□□ -2.09
NKX2-2O95096 MIR6895-201ENST00000613497 78 ntBASIC2□□□□□ -2.09
NKX2-2O95096 AC083806.3-201ENST00000614016 455 ntBASIC2□□□□□ -2.09
NKX2-2O95096 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
NKX2-2O95096 AC008555.8-201ENST00000623602 2168 ntBASIC2□□□□□ -2.09
NKX2-2O95096 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
NKX2-2O95096 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
NKX2-2O95096 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.99□□□□□ -2.09
NKX2-2O95096 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.99□□□□□ -2.09
NKX2-2O95096 Y_RNA.445-201ENST00000384168 102 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 RNU6-474P-201ENST00000384243 107 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 RNA5SP501-201ENST00000410990 112 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 AC016909.1-201ENST00000415916 166 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX2-2O95096 SNORA31.11-201ENST00000516528 139 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
NKX2-2O95096 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.99□□□□□ -2.09
NKX2-2O95096 AC023442.1-201ENST00000531247 422 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 AC018448.1-201ENST00000552843 316 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 MYL12BP1-201ENST00000569826 507 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 MIR5002-201ENST00000584713 97 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 SNORD58B-201ENST00000607313 66 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.15-201ENST00000611544 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.16-201ENST00000613119 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.12-201ENST00000613778 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.20-201ENST00000613956 192 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.9-201ENST00000615427 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.11-201ENST00000616345 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.2-201ENST00000616535 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.3-201ENST00000617785 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.19-201ENST00000618602 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 RNU2-1-201ENST00000618664 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.6-201ENST00000619225 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.5-201ENST00000619465 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U2.10-201ENST00000620268 191 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.99□□□□□ -2.09
NKX2-2O95096 AC134503.1-201ENST00000633048 54 ntBASIC1.99□□□□□ -2.09
NKX2-2O95096 Y_RNA.128-201ENST00000363391 112 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 Y_RNA.813-201ENST00000364639 102 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 SNORA80E-201ENST00000384744 137 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 SNORD78.2-201ENST00000391076 69 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 AL512604.1-201ENST00000404812 257 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 AL117342.1-201ENST00000404861 406 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 MCFD2P1-201ENST00000417812 300 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 PMCHL1-202ENST00000423102 261 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.98□□□□□ -2.09
NKX2-2O95096 FCF1P4-201ENST00000448326 183 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 Y_RNA.631-201ENST00000459607 101 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 RNU6-1012P-201ENST00000516606 109 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 RNA5SP82-201ENST00000516707 92 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 RN7SKP295-201ENST00000517264 153 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 SNORD53-201ENST00000579969 78 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 MIR5188-201ENST00000583467 113 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 AC006157.1-201ENST00000611750 366 ntBASIC1.98□□□□□ -2.09
NKX2-2O95096 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NKX2-2O95096 Y_RNA.31-201ENST00000362574 102 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 Y_RNA.138-201ENST00000363462 102 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 SNORA6-201ENST00000384033 151 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 Y_RNA.500-201ENST00000384466 111 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 MIR144-201ENST00000384886 86 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 MRPL35P1-201ENST00000404272 572 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 AL135786.1-201ENST00000415892 214 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 MTCO2P12-201ENST00000427426 682 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 AL160004.2-201ENST00000432935 350 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 MTND4P19-201ENST00000446659 478 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 RPL23AP3-201ENST00000453844 468 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 AC112492.4-201ENST00000456549 352 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 RNU6-625P-201ENST00000459412 107 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 RPL26P26-201ENST00000480251 434 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 RNU6-107P-201ENST00000516643 102 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 GNAI2P1-201ENST00000541815 315 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.97□□□□□ -2.09
NKX2-2O95096 AL109918.3-201ENST00000603072 338 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 AC007485.1-201ENST00000616755 206 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 AL590808.1-201ENST00000618696 141 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 AC006001.4-201ENST00000622243 395 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 ZNF702P-202ENST00000434269 1966 ntBASIC1.97□□□□□ -2.09
NKX2-2O95096 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NKX2-2O95096 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.97□□□□□ -2.09
NKX2-2O95096 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
NKX2-2O95096 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.96□□□□□ -2.1
NKX2-2O95096 AL596028.1-201ENST00000326971 197 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 snoU2-30.2-201ENST00000362805 70 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 RNU4-76P-201ENST00000364509 141 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 RNU6-1240P-201ENST00000365155 104 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 RNU6-708P-201ENST00000384217 107 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 Y_RNA.498-201ENST00000384460 102 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 MIR17-201ENST00000385012 84 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 SNORA11.4-201ENST00000408823 129 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 SDAD1P3-201ENST00000427380 333 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 RAB28P5-201ENST00000427490 651 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 AC099677.2-201ENST00000436385 175 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 HMGN2P34-201ENST00000437647 269 ntBASIC1.96□□□□□ -2.1
NKX2-2O95096 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.96□□□□□ -2.1
NKX2-2O95096 AC093852.1-201ENST00000503587 266 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms