Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 SEPT14P2-201ENST00000453405 183 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 MTND1P11-201ENST00000456661 876 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 AC019235.1-201ENST00000503847 207 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.99□□□□□ -2.25
SEMA3DO95025 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.99□□□□□ -2.25
SEMA3DO95025 AC103851.1-201ENST00000506833 274 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.99□□□□□ -2.25
SEMA3DO95025 SEPT14P4-201ENST00000513445 186 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 RNU6-1281P-201ENST00000516223 105 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 AC025647.1-201ENST00000517879 253 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 MTND1P5-201ENST00000517906 940 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 FO082796.1-201ENST00000523795 183 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 ZNF519P2-201ENST00000557032 169 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 TPRKBP2-201ENST00000565969 475 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
SEMA3DO95025 AL929325.1-201ENST00000603096 117 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 AC092954.2-201ENST00000609103 430 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 AC009033.1-201ENST00000624279 431 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 snoZ196.1-201ENST00000625269 89 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 AC099654.12-201ENST00000639868 649 ntBASIC0.99□□□□□ -2.25
SEMA3DO95025 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SEMA3DO95025 RNA5SP327-201ENST00000362494 101 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 RNU6-95P-201ENST00000384697 107 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 MIR320B2-201ENST00000408479 138 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.98□□□□□ -2.25
SEMA3DO95025 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.98□□□□□ -2.25
SEMA3DO95025 NDUFA5P4-201ENST00000436704 385 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 AC005002.2-201ENST00000438228 269 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.98□□□□□ -2.25
SEMA3DO95025 DYNLT3P2-201ENST00000442517 295 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 RPS27P1-201ENST00000450552 247 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 PCMTD1P1-201ENST00000455560 355 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 AC087343.1-201ENST00000477341 475 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 AL133373.1-201ENST00000497098 94 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 RNU6-344P-201ENST00000516635 111 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 AC245008.1-201ENST00000608123 476 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.98□□□□□ -2.25
SEMA3DO95025 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 AC008873.1-201ENST00000625051 138 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.98□□□□□ -2.25
SEMA3DO95025 U6.108-201ENST00000637764 58 ntBASIC0.98□□□□□ -2.25
SEMA3DO95025 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SEMA3DO95025 Y_RNA.164-201ENST00000363709 102 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 SNORD87-201ENST00000364849 89 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 RNA5SP259-201ENST00000365541 109 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 RNU6-1065P-201ENST00000384513 106 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SEMA3DO95025 AL356776.1-201ENST00000406574 447 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 RNU6-908P-201ENST00000410160 94 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 SNX2P2-201ENST00000424553 323 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.97□□□□□ -2.25
SEMA3DO95025 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.97□□□□□ -2.25
SEMA3DO95025 RNU6-221P-201ENST00000459541 99 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 AC005840.1-201ENST00000498412 377 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 MTCO2P30-201ENST00000503662 364 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 UBL5P1-201ENST00000507979 193 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 SUMO2P16-201ENST00000519475 264 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 AL512310.8-201ENST00000550183 120 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.97□□□□□ -2.25
SEMA3DO95025 AL162413.1-201ENST00000603198 110 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 AC040896.1-201ENST00000613819 479 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 AC006504.8-201ENST00000621046 635 ntBASIC0.97□□□□□ -2.25
SEMA3DO95025 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
SEMA3DO95025 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 Y_RNA.38-201ENST00000362617 102 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 RNU6-727P-201ENST00000363592 107 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 RNU6-1240P-201ENST00000365155 104 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 RNU6-128P-201ENST00000383976 107 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 MIR515-2-201ENST00000384883 83 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 MIR515-1-201ENST00000384884 83 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.96□□□□□ -2.26
SEMA3DO95025 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.96□□□□□ -2.26
SEMA3DO95025 PGBD4P5-201ENST00000445958 426 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 MTND1P29-201ENST00000448112 647 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.96□□□□□ -2.26
SEMA3DO95025 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.96□□□□□ -2.26
SEMA3DO95025 SNORA25.14-201ENST00000516481 132 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 SNORA31.10-201ENST00000516482 106 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 RNU6-58P-201ENST00000517143 103 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 RNA5SP454-201ENST00000517231 127 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 AC024995.1-201ENST00000523014 93 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 AK6P2-201ENST00000549020 471 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 MIR4781-201ENST00000585250 76 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 MZT1P2-201ENST00000604387 248 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 AC022217.4-201ENST00000604389 163 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 SNORD11B-201ENST00000607707 90 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 AC021506.2-201ENST00000612354 169 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 DISC2.1-201ENST00000612827 205 ntBASIC0.96□□□□□ -2.26
SEMA3DO95025 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
SEMA3DO95025 Y_RNA.238-201ENST00000364441 102 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 RNU4-9P-201ENST00000364951 139 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 RNU6-53P-201ENST00000365367 106 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 SNORD116-2-201ENST00000384274 95 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 SNORD116-6-201ENST00000384711 96 ntBASIC0.95□□□□□ -2.26
SEMA3DO95025 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 237.9 ms