Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AL627311.1-201ENST00000431514 115 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 MTND1P31-201ENST00000449206 961 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.46□□□□□ -2.48
USH2AO75445 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.46□□□□□ -2.48
USH2AO75445 MIR548AM-201ENST00000584298 74 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AC105081.1-201ENST00000617727 106 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 MIR6079-201ENST00000635807 62 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 MIR29B1-201ENST00000385015 81 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 MIR190B-201ENST00000401119 79 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 Y_RNA.591-201ENST00000410228 104 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-0.46□□□□□ -2.48
USH2AO75445 MTCO2P1-201ENST00000424648 477 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.46□□□□□ -2.48
USH2AO75445 RNU7-27P-201ENST00000459281 62 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.46□□□□□ -2.48
USH2AO75445 SNORA18.4-201ENST00000516440 124 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 SNORD38.3-201ENST00000516599 73 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AC109446.1-201ENST00000566172 220 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.46□□□□□ -2.48
USH2AO75445 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 MIR520A-201ENST00000384862 85 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 MIR1290-201ENST00000408735 78 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AC006548.1-201ENST00000427470 102 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 MTND2P8-201ENST00000450555 1025 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 SNORD123-201ENST00000459473 70 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 TMEM251P1-201ENST00000503717 318 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.46□□□□□ -2.48
USH2AO75445 AC006380.1-201ENST00000603598 186 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AL359999.1-201ENST00000604513 294 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 AC023510.2-201ENST00000622162 746 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 CR381572.1-201ENST00000625098 102 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 U6.99-201ENST00000637524 83 ntBASIC-0.46□□□□□ -2.48
USH2AO75445 RNU6-1125P-201ENST00000363601 107 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 MT-TP-201ENST00000387461 68 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 TMSB4XP8-201ENST00000402089 135 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 AL606845.1-201ENST00000404881 255 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 MIR548K-201ENST00000408406 116 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.47□□□□□ -2.48
USH2AO75445 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.47□□□□□ -2.48
USH2AO75445 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.47□□□□□ -2.48
USH2AO75445 CDR1-202ENST00000625883 1485 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 RNU4-15P-201ENST00000362613 141 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 RNU6-374P-201ENST00000364146 108 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 MIR487B-201ENST00000385021 84 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 RNU6-141P-201ENST00000410499 105 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.47□□□□□ -2.48
USH2AO75445 USP9YP16-201ENST00000430287 407 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC-0.47□□□□□ -2.48
USH2AO75445 AC009237.7-201ENST00000447357 229 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 AL160314.1-201ENST00000490836 438 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.47□□□□□ -2.48
USH2AO75445 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 SNORD60.2-201ENST00000516883 86 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.47□□□□□ -2.48
USH2AO75445 AC011195.1-201ENST00000578177 177 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 U7.6-201ENST00000610841 64 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 MIR6851-201ENST00000617060 67 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 AL162376.1-201ENST00000624117 175 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 AC080188.3-201ENST00000624842 748 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC-0.47□□□□□ -2.48
USH2AO75445 RNU6-1210P-201ENST00000363775 107 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 RNU4-10P-201ENST00000364383 140 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 RNU6-431P-201ENST00000383874 107 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 MTCO3P27-201ENST00000514397 196 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 SNORD19.2-201ENST00000516978 73 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.47□□□□□ -2.48
USH2AO75445 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.47□□□□□ -2.48
USH2AO75445 AC009268.1-201ENST00000561352 1203 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.47□□□□□ -2.48
USH2AO75445 RNA5SP391-201ENST00000363456 119 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.47□□□□□ -2.49
USH2AO75445 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 AL117339.3-201ENST00000418733 162 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 AL360271.2-201ENST00000447710 161 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 MEMO1P3-201ENST00000459811 302 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 AL442663.2-201ENST00000554385 511 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 RNU6-90P-201ENST00000606352 106 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.47□□□□□ -2.49
USH2AO75445 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.47□□□□□ -2.49
USH2AO75445 RNU6-511P-201ENST00000363496 107 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 SNORA22B-201ENST00000383876 138 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RNU6-331P-201ENST00000384724 107 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 MIR888-201ENST00000401186 77 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 MIR1827-201ENST00000408549 66 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AC098592.2-201ENST00000413158 265 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.48□□□□□ -2.49
USH2AO75445 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 SNORA18.7-201ENST00000516910 131 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 RNU6-410P-201ENST00000517006 107 ntBASIC-0.48□□□□□ -2.49
USH2AO75445 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC-0.48□□□□□ -2.49
USH2AO75445 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.48□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms