Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 Y_RNA.605-201ENST00000410577 105 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNA5SP489-201ENST00000410986 109 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNA5SP450-201ENST00000411206 102 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 AL356320.1-201ENST00000429616 163 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 MTND2P29-201ENST00000438595 412 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 AL353689.1-201ENST00000438895 199 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNU7-169P-201ENST00000459456 61 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 AC074133.1-201ENST00000515696 183 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNU6-948P-201ENST00000516374 107 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 RNU4-77P-201ENST00000516692 156 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.56□□□□□ -2.16
ZNF253O75346 AC092447.9-201ENST00000603395 144 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 AL357075.2-201ENST00000614906 189 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 AL590240.4-201ENST00000616908 390 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 snoZ196.1-201ENST00000625269 89 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 AP006437.1-201ENST00000641440 3685 ntBASIC1.56□□□□□ -2.16
ZNF253O75346 ZNF355P-201ENST00000427301 3216 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 Y_RNA.39-201ENST00000362620 98 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 RNU6-23P-201ENST00000363283 107 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 RNU6-418P-201ENST00000384035 107 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 Y_RNA.445-201ENST00000384168 102 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 MIR628-201ENST00000385229 95 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 MIR548B-201ENST00000385247 97 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 PMCHL1-202ENST00000423102 261 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.55□□□□□ -2.16
ZNF253O75346 RNA5SP233-201ENST00000459153 113 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 RNU7-57P-201ENST00000459540 60 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 RNU6-221P-201ENST00000459541 99 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 Y_RNA.631-201ENST00000459607 101 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 AP001486.1-201ENST00000463339 476 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 Y_RNA.661-201ENST00000516003 99 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 RNU6-475P-201ENST00000516073 104 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ZNF253O75346 AC074050.1-201ENST00000563247 211 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 AC006600.1-201ENST00000572529 153 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.55□□□□□ -2.16
ZNF253O75346 AL162373.1-201ENST00000620433 407 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.55□□□□□ -2.16
ZNF253O75346 AC134503.1-201ENST00000633048 54 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 AL606534.2-204ENST00000635008 178 ntBASIC1.55□□□□□ -2.16
ZNF253O75346 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.55□□□□□ -2.16
ZNF253O75346 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
ZNF253O75346 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
ZNF253O75346 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
ZNF253O75346 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.54□□□□□ -2.16
ZNF253O75346 MIR410-201ENST00000362222 80 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 RNA5SP289-201ENST00000362332 137 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 Y_RNA.27-201ENST00000362540 103 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 Y_RNA.128-201ENST00000363391 112 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 RNU4-76P-201ENST00000364509 141 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
ZNF253O75346 SNORD12B-201ENST00000410433 91 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 RNU4-53P-201ENST00000410828 140 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 ELOCP21-201ENST00000412558 336 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 MCFD2P1-201ENST00000417812 300 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 TOMM22P2-201ENST00000430735 237 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 HMGN2P3-201ENST00000433603 273 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 HMGN2P5-201ENST00000436882 273 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.54□□□□□ -2.16
ZNF253O75346 UQCRBP2-201ENST00000447827 297 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 AC016717.1-201ENST00000448918 286 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 PCNPP5-201ENST00000452246 481 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.54□□□□□ -2.16
ZNF253O75346 SNORA40.14-201ENST00000516543 86 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 RN7SKP295-201ENST00000517264 153 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 AC005786.1-201ENST00000588553 154 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 AC007229.1-201ENST00000590455 412 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 AL353149.1-201ENST00000610667 244 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 SDR42E1P4-201ENST00000620894 481 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 AC022513.1-201ENST00000624512 117 ntBASIC1.54□□□□□ -2.16
ZNF253O75346 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ZNF253O75346 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
ZNF253O75346 Y_RNA.138-201ENST00000363462 102 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 Y_RNA.813-201ENST00000364639 102 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 RNU6-1264P-201ENST00000383891 107 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 RNU6-474P-201ENST00000384243 107 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 MIR597-201ENST00000384968 97 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 RNU11-3P-201ENST00000391111 133 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 MIR548P-201ENST00000408336 84 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 MIR1185-2-201ENST00000408687 86 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 AL354751.2-201ENST00000415471 210 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 MTCO3P19-201ENST00000415864 321 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
ZNF253O75346 MTND5P6-201ENST00000422338 1798 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 HMGN2P19-201ENST00000425149 265 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 MTCO2P12-201ENST00000427426 682 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 AC096644.2-201ENST00000429278 159 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.53□□□□□ -2.16
ZNF253O75346 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.53□□□□□ -2.16
ZNF253O75346 MTND4P19-201ENST00000446659 478 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 AC112492.4-201ENST00000456549 352 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 SNORA40.9-201ENST00000515895 93 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 RNU6-1012P-201ENST00000516606 109 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 AC023442.1-201ENST00000531247 422 ntBASIC1.53□□□□□ -2.16
ZNF253O75346 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.53□□□□□ -2.16
ZNF253O75346 GNAI2P1-201ENST00000541815 315 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms