Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL138878.1-201ENST00000405131 347 ntBASIC4.37□□□□□ -1.71
RNF40O75150 CYCSP19-201ENST00000411715 316 ntBASIC4.37□□□□□ -1.71
RNF40O75150 RNA5SP310-201ENST00000459084 116 ntBASIC4.37□□□□□ -1.71
RNF40O75150 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF40O75150 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF40O75150 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF40O75150 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF40O75150 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF40O75150 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF40O75150 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF40O75150 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF40O75150 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF40O75150 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNF40O75150 Y_RNA.244-201ENST00000364484 109 ntBASIC4.36□□□□□ -1.71
RNF40O75150 RNU6-1235P-201ENST00000384559 107 ntBASIC4.36□□□□□ -1.71
RNF40O75150 RNU6-498P-201ENST00000459468 107 ntBASIC4.36□□□□□ -1.71
RNF40O75150 AC099522.1-202ENST00000514718 367 ntBASIC4.36□□□□□ -1.71
RNF40O75150 MIR449C-201ENST00000516047 92 ntBASIC4.36□□□□□ -1.71
RNF40O75150 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF40O75150 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF40O75150 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNF40O75150 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF40O75150 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF40O75150 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF40O75150 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF40O75150 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF40O75150 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF40O75150 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF40O75150 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RNF40O75150 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF40O75150 MIR423-201ENST00000362201 94 ntBASIC4.35□□□□□ -1.71
RNF40O75150 RNU6-349P-201ENST00000362402 107 ntBASIC4.35□□□□□ -1.71
RNF40O75150 RNU6-1296P-201ENST00000383879 107 ntBASIC4.35□□□□□ -1.71
RNF40O75150 RNU6-787P-201ENST00000384032 107 ntBASIC4.35□□□□□ -1.71
RNF40O75150 MIR518F-201ENST00000384973 87 ntBASIC4.35□□□□□ -1.71
RNF40O75150 RPS29P7-201ENST00000439662 171 ntBASIC4.35□□□□□ -1.71
RNF40O75150 RNA5SP367-201ENST00000516557 118 ntBASIC4.35□□□□□ -1.71
RNF40O75150 RN7SKP209-201ENST00000516888 304 ntBASIC4.35□□□□□ -1.71
RNF40O75150 AC109329.2-201ENST00000519658 482 ntBASIC4.35□□□□□ -1.71
RNF40O75150 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF40O75150 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF40O75150 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF40O75150 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.35□□□□□ -1.71
RNF40O75150 AL162726.3-218ENST00000636401 95 ntBASIC4.35□□□□□ -1.71
RNF40O75150 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF40O75150 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF40O75150 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF40O75150 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF40O75150 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF40O75150 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF40O75150 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF40O75150 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF40O75150 SNORD31B-201ENST00000364977 69 ntBASIC4.34□□□□□ -1.71
RNF40O75150 RNU6-234P-201ENST00000365229 104 ntBASIC4.34□□□□□ -1.71
RNF40O75150 RNU6-279P-201ENST00000391297 101 ntBASIC4.34□□□□□ -1.71
RNF40O75150 Z98941.1-201ENST00000407764 100 ntBASIC4.34□□□□□ -1.71
RNF40O75150 AL513477.1-202ENST00000417061 214 ntBASIC4.34□□□□□ -1.71
RNF40O75150 Y_RNA.666-201ENST00000516187 112 ntBASIC4.34□□□□□ -1.71
RNF40O75150 RN7SKP282-201ENST00000516824 299 ntBASIC4.34□□□□□ -1.71
RNF40O75150 AC068657.1-201ENST00000520807 306 ntBASIC4.34□□□□□ -1.71
RNF40O75150 RN7SL703P-201ENST00000578485 302 ntBASIC4.34□□□□□ -1.71
RNF40O75150 AC008507.4-201ENST00000585464 127 ntBASIC4.34□□□□□ -1.71
RNF40O75150 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.34□□□□□ -1.71
RNF40O75150 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF40O75150 MAPK10-373ENST00000641983 6772 ntBASIC4.33□□□□□ -1.72
RNF40O75150 RNU1-18P-201ENST00000363062 164 ntBASIC4.33□□□□□ -1.72
RNF40O75150 Y_RNA.298-201ENST00000364960 107 ntBASIC4.33□□□□□ -1.72
RNF40O75150 RHEBP3-201ENST00000411920 351 ntBASIC4.33□□□□□ -1.72
RNF40O75150 RNU7-23P-201ENST00000459465 62 ntBASIC4.33□□□□□ -1.72
RNF40O75150 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF40O75150 SCARNA23-201ENST00000516060 130 ntBASIC4.33□□□□□ -1.72
RNF40O75150 RNU7-172P-201ENST00000517125 64 ntBASIC4.33□□□□□ -1.72
RNF40O75150 AC006064.5-201ENST00000541782 248 ntBASIC4.33□□□□□ -1.72
RNF40O75150 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF40O75150 MIR4438-201ENST00000585271 93 ntBASIC4.33□□□□□ -1.72
RNF40O75150 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF40O75150 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF40O75150 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RNF40O75150 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF40O75150 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF40O75150 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF40O75150 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RNF40O75150 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF40O75150 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RNF40O75150 RNU6-1240P-201ENST00000365155 104 ntBASIC4.32□□□□□ -1.72
RNF40O75150 RNA5SP239-201ENST00000410218 129 ntBASIC4.32□□□□□ -1.72
RNF40O75150 AL500522.2-201ENST00000448562 343 ntBASIC4.32□□□□□ -1.72
RNF40O75150 RN7SL93P-201ENST00000463035 293 ntBASIC4.32□□□□□ -1.72
RNF40O75150 RNU6-948P-201ENST00000516374 107 ntBASIC4.32□□□□□ -1.72
RNF40O75150 RNA5SP73-201ENST00000516744 108 ntBASIC4.32□□□□□ -1.72
RNF40O75150 AC110741.2-201ENST00000605278 268 ntBASIC4.32□□□□□ -1.72
RNF40O75150 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
RNF40O75150 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
RNF40O75150 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF40O75150 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF40O75150 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF40O75150 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
RNF40O75150 SNORA63D-201ENST00000364359 132 ntBASIC4.31□□□□□ -1.72
RNF40O75150 Y_RNA.265-201ENST00000364677 108 ntBASIC4.31□□□□□ -1.72
RNF40O75150 RNU6-1104P-201ENST00000384723 104 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms