Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNU6-991P-201ENST00000516168 107 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 RNA5SP24-201ENST00000516478 95 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 CYCSP26-201ENST00000534107 320 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 SNORD53-201ENST00000579969 78 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 AL590808.1-201ENST00000618696 141 ntBASIC2.13□□□□□ -2.07
ZIC3O60481 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ZIC3O60481 MIR6073-201ENST00000352083 89 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 MIR340-201ENST00000362125 95 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 RNU6-626P-201ENST00000363354 107 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 Y_RNA.152-201ENST00000363578 100 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 Y_RNA.498-201ENST00000384460 102 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 RNU1-148P-201ENST00000384472 162 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 RNU4-53P-201ENST00000410828 140 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 SRIP3-201ENST00000413200 219 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 RAB28P5-201ENST00000427490 651 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC3O60481 PRELID3BP1-201ENST00000457142 540 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 AC008413.1-201ENST00000511864 177 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 SNORA4.4-201ENST00000515921 135 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC3O60481 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.12□□□□□ -2.07
ZIC3O60481 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.12□□□□□ -2.07
ZIC3O60481 AP002001.1-203ENST00000534002 267 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.12□□□□□ -2.07
ZIC3O60481 AC055872.1-201ENST00000570978 278 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 AC136932.1-201ENST00000574771 208 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 MIR4423-201ENST00000580922 80 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 PRR13P7-201ENST00000605538 430 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 AL162730.1-201ENST00000605734 292 ntBASIC2.12□□□□□ -2.07
ZIC3O60481 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.12□□□□□ -2.07
ZIC3O60481 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.11□□□□□ -2.07
ZIC3O60481 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
ZIC3O60481 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.11□□□□□ -2.07
ZIC3O60481 AC080100.1-201ENST00000624239 5356 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNU6-1309P-201ENST00000363305 108 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 Y_RNA.143-201ENST00000363520 106 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNU6-770P-201ENST00000363929 105 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 SNORD114-30-201ENST00000364448 72 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNU6-438P-201ENST00000365561 103 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNU6-1264P-201ENST00000383891 107 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNU6-20P-201ENST00000384106 107 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNU6-1109P-201ENST00000391187 107 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNA5SP508-201ENST00000411327 119 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 AC123900.1-201ENST00000420390 96 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 AC018634.1-201ENST00000437554 401 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 AC005002.2-201ENST00000438228 269 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 MTCO1P44-201ENST00000441935 243 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 RNU1-104P-201ENST00000517280 175 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.11□□□□□ -2.07
ZIC3O60481 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.11□□□□□ -2.07
ZIC3O60481 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.11□□□□□ -2.07
ZIC3O60481 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.11□□□□□ -2.07
ZIC3O60481 MIR4446-201ENST00000578505 67 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 MIR4435-1-201ENST00000582552 80 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 MIR4753-201ENST00000585119 83 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 AC025754.2-201ENST00000606491 432 ntBASIC2.11□□□□□ -2.07
ZIC3O60481 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ZIC3O60481 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
ZIC3O60481 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
ZIC3O60481 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
ZIC3O60481 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZIC3O60481 Y_RNA.105-201ENST00000363182 111 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 SNORA38-201ENST00000363946 132 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 SNORA67.1-201ENST00000364749 141 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 Y_RNA.462-201ENST00000384268 102 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 RNU6-301P-201ENST00000384277 107 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 RNU6-975P-201ENST00000384296 105 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 MIR1262-201ENST00000408276 93 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 RNU6-121P-201ENST00000410525 99 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 RNU7-57P-201ENST00000459540 60 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 AC087441.2-201ENST00000529141 262 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.1□□□□□ -2.07
ZIC3O60481 AL109918.3-201ENST00000603072 338 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 AL049779.4-201ENST00000604500 156 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 MIR3674-201ENST00000636576 68 ntBASIC2.1□□□□□ -2.07
ZIC3O60481 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZIC3O60481 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ZIC3O60481 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.09□□□□□ -2.07
ZIC3O60481 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ZIC3O60481 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ZIC3O60481 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.09□□□□□ -2.07
ZIC3O60481 Y_RNA.26-201ENST00000362539 101 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 Y_RNA.230-201ENST00000364348 109 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 RNU6-806P-201ENST00000365147 105 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 RNU6-418P-201ENST00000384035 107 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 SNORD63-201ENST00000384262 68 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 RNU6-937P-201ENST00000384325 106 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 SNORD115-46-201ENST00000390982 71 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 MIR1185-2-201ENST00000408687 86 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 RNA5SP181-201ENST00000410246 98 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 RNU2-20P-201ENST00000410425 191 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 AC007064.1-201ENST00000412238 351 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
ZIC3O60481 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.09□□□□□ -2.07
ZIC3O60481 TOMM22P2-201ENST00000430735 237 ntBASIC2.09□□□□□ -2.07
ZIC3O60481 RPS15AP28-201ENST00000435088 386 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms