Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC005014.2-201ENST00000607795 599 ntBASIC1.37□□□□□ -2.19
TRAF3IP2O43734 AL590240.4-201ENST00000616908 390 ntBASIC1.37□□□□□ -2.19
TRAF3IP2O43734 PISRT1.1-201ENST00000616930 107 ntBASIC1.37□□□□□ -2.19
TRAF3IP2O43734 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAF3IP2O43734 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.37□□□□□ -2.19
TRAF3IP2O43734 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.37□□□□□ -2.19
TRAF3IP2O43734 SNORA72.1-201ENST00000363485 129 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 SNORD114-6-201ENST00000364393 72 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 SNORA67.2-201ENST00000384300 149 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 Y_RNA.474-201ENST00000384341 102 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 RNU6-541P-201ENST00000384709 110 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 MIR597-201ENST00000384968 97 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 MIR487A-201ENST00000385009 80 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 RNU6-700P-201ENST00000391043 107 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 RNU11-3P-201ENST00000391111 133 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 RNU4-62P-201ENST00000410125 130 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 AP1B1P2-201ENST00000416196 106 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 AC244636.1-201ENST00000421152 228 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 AC139712.2-201ENST00000424302 339 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 MTCYBP10-201ENST00000424905 650 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 RNU6-1114P-201ENST00000516022 107 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAF3IP2O43734 RRN3P3-201ENST00000549207 578 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.36□□□□□ -2.19
TRAF3IP2O43734 MIR4285-201ENST00000581001 85 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 AC113139.1-201ENST00000605049 239 ntBASIC1.36□□□□□ -2.19
TRAF3IP2O43734 Y_RNA.2-201ENST00000362330 96 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 RNU6-545P-201ENST00000362681 104 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 Y_RNA.405-201ENST00000383979 100 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 Y_RNA.451-201ENST00000384200 100 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 RNU6-975P-201ENST00000384296 105 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 RNU6-1235P-201ENST00000384559 107 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 Y_RNA.524-201ENST00000384564 100 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 SNORA8-201ENST00000384574 139 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 Y_RNA.561-201ENST00000384694 100 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 MIR320A-201ENST00000385302 82 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 SNORA75.4-201ENST00000391278 119 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAF3IP2O43734 MTND3P23-201ENST00000431980 347 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 MTCO3P29-201ENST00000432119 779 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 RNU6-498P-201ENST00000459468 107 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 RNU6-948P-201ENST00000516374 107 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAF3IP2O43734 SUB1P3-201ENST00000564581 315 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 MIR4781-201ENST00000585250 76 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 AL353149.1-201ENST00000610667 244 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 AL669831.3-213ENST00000636676 183 ntBASIC1.35□□□□□ -2.19
TRAF3IP2O43734 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
TRAF3IP2O43734 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAF3IP2O43734 RNY1P16-201ENST00000363063 111 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 Y_RNA.142-201ENST00000363491 102 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 RNU6-873P-201ENST00000363833 107 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 Y_RNA.404-201ENST00000383978 102 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 MIR10B-201ENST00000385011 110 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 RNA5SP212-201ENST00000391223 107 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 MIR190B-201ENST00000401119 79 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 RNU6-955P-201ENST00000410497 104 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 RNU4-14P-201ENST00000410858 122 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 RNU6-321P-201ENST00000410912 106 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 USP9YP16-201ENST00000430287 407 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 USP9YP23-201ENST00000455085 407 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AP000870.1-201ENST00000472927 406 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 RPL7P42-201ENST00000481005 679 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 FGF7P4-201ENST00000509595 295 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AC093303.1-201ENST00000514549 295 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 SNORA25.14-201ENST00000516481 132 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 SUMO2P18-201ENST00000518873 252 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAF3IP2O43734 SNORD53B-201ENST00000577887 78 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 MIR4303-201ENST00000581299 66 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AC005730.3-201ENST00000583067 366 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AL355802.3-201ENST00000607571 545 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AC022513.1-201ENST00000624512 117 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 AC068205.3-201ENST00000636385 468 ntBASIC1.34□□□□□ -2.19
TRAF3IP2O43734 WWP1P1-201ENST00000466609 2769 ntBASIC1.34□□□□□ -2.2
TRAF3IP2O43734 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TRAF3IP2O43734 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
TRAF3IP2O43734 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRAF3IP2O43734 RNU6-1188P-201ENST00000363795 107 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 Y_RNA.226-201ENST00000364337 114 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 Y_RNA.303-201ENST00000364998 94 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 Y_RNA.364-201ENST00000365532 101 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAF3IP2O43734 RNU6-793P-201ENST00000384233 104 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 Y_RNA.473-201ENST00000384333 102 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 MIR549A-201ENST00000385268 96 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 MTCYBP4-201ENST00000401524 249 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 RNA5SP504-201ENST00000410676 117 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 RNA5SP501-201ENST00000410990 112 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 RNU6-370P-201ENST00000411008 104 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 AC009310.1-201ENST00000414414 451 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 ATP5J2P3-201ENST00000451550 258 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 RNU1-98P-201ENST00000458992 160 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 MTND4P17-201ENST00000470444 350 ntBASIC1.33□□□□□ -2.2
TRAF3IP2O43734 RPL17P19-201ENST00000489069 552 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms