Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.3□□□□□ -2.04
LDB2O43679 LINC02555-201ENST00000563933 1951 ntBASIC2.3□□□□□ -2.04
LDB2O43679 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
LDB2O43679 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
LDB2O43679 Y_RNA.26-201ENST00000362539 101 ntBASIC2.29□□□□□ -2.04
LDB2O43679 Y_RNA.64-201ENST00000362845 102 ntBASIC2.29□□□□□ -2.04
LDB2O43679 Y_RNA.105-201ENST00000363182 111 ntBASIC2.29□□□□□ -2.04
LDB2O43679 RNA5SP393-201ENST00000363423 117 ntBASIC2.29□□□□□ -2.04
LDB2O43679 Y_RNA.143-201ENST00000363520 106 ntBASIC2.29□□□□□ -2.04
LDB2O43679 RNU6-727P-201ENST00000363592 107 ntBASIC2.29□□□□□ -2.04
LDB2O43679 RNA5SP240-201ENST00000365355 128 ntBASIC2.29□□□□□ -2.04
LDB2O43679 Y_RNA.462-201ENST00000384268 102 ntBASIC2.29□□□□□ -2.04
LDB2O43679 SNORD115-46-201ENST00000390982 71 ntBASIC2.29□□□□□ -2.04
LDB2O43679 RNU6-121P-201ENST00000410525 99 ntBASIC2.29□□□□□ -2.04
LDB2O43679 RNU2-63P-201ENST00000410792 194 ntBASIC2.29□□□□□ -2.04
LDB2O43679 Z98742.3-201ENST00000418637 326 ntBASIC2.29□□□□□ -2.04
LDB2O43679 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.29□□□□□ -2.04
LDB2O43679 RPS23P5-201ENST00000495419 428 ntBASIC2.29□□□□□ -2.04
LDB2O43679 CKS1BP2-201ENST00000497342 240 ntBASIC2.29□□□□□ -2.04
LDB2O43679 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.29□□□□□ -2.04
LDB2O43679 AP003733.2-201ENST00000529409 171 ntBASIC2.29□□□□□ -2.04
LDB2O43679 RRN3P3-201ENST00000549207 578 ntBASIC2.29□□□□□ -2.04
LDB2O43679 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.29□□□□□ -2.04
LDB2O43679 MIR4300-201ENST00000581016 96 ntBASIC2.29□□□□□ -2.04
LDB2O43679 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.29□□□□□ -2.04
LDB2O43679 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.29□□□□□ -2.04
LDB2O43679 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
LDB2O43679 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
LDB2O43679 Y_RNA.222-201ENST00000364264 102 ntBASIC2.28□□□□□ -2.04
LDB2O43679 RNU6-702P-201ENST00000364982 107 ntBASIC2.28□□□□□ -2.04
LDB2O43679 RNU6-1072P-201ENST00000384703 107 ntBASIC2.28□□□□□ -2.04
LDB2O43679 RNU6-443P-201ENST00000384780 107 ntBASIC2.28□□□□□ -2.04
LDB2O43679 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
LDB2O43679 AL033519.2-201ENST00000403958 392 ntBASIC2.28□□□□□ -2.04
LDB2O43679 SNORA3.2-201ENST00000408221 125 ntBASIC2.28□□□□□ -2.04
LDB2O43679 AC005002.2-201ENST00000438228 269 ntBASIC2.28□□□□□ -2.04
LDB2O43679 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.28□□□□□ -2.04
LDB2O43679 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
LDB2O43679 RNU6-408P-201ENST00000515910 100 ntBASIC2.28□□□□□ -2.04
LDB2O43679 RNU5F-4P-201ENST00000516581 114 ntBASIC2.28□□□□□ -2.04
LDB2O43679 SNORA48.11-201ENST00000517015 89 ntBASIC2.28□□□□□ -2.04
LDB2O43679 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.28□□□□□ -2.04
LDB2O43679 AC018448.1-201ENST00000552843 316 ntBASIC2.28□□□□□ -2.04
LDB2O43679 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.28□□□□□ -2.04
LDB2O43679 AL449363.1-201ENST00000617815 186 ntBASIC2.28□□□□□ -2.04
LDB2O43679 AC068205.3-201ENST00000636385 468 ntBASIC2.28□□□□□ -2.04
LDB2O43679 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.28□□□□□ -2.04
LDB2O43679 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
LDB2O43679 ZNF658B-202ENST00000615961 3375 ntBASIC2.27□□□□□ -2.05
LDB2O43679 RNU6-961P-201ENST00000363893 105 ntBASIC2.27□□□□□ -2.05
LDB2O43679 Y_RNA.193-201ENST00000363979 102 ntBASIC2.27□□□□□ -2.05
LDB2O43679 Y_RNA.230-201ENST00000364348 109 ntBASIC2.27□□□□□ -2.05
LDB2O43679 RNU1-91P-201ENST00000364746 163 ntBASIC2.27□□□□□ -2.05
LDB2O43679 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.27□□□□□ -2.05
LDB2O43679 Y_RNA.415-201ENST00000384012 112 ntBASIC2.27□□□□□ -2.05
LDB2O43679 SNORD63-201ENST00000384262 68 ntBASIC2.27□□□□□ -2.05
LDB2O43679 RNU6-937P-201ENST00000384325 106 ntBASIC2.27□□□□□ -2.05
LDB2O43679 ELOCP21-201ENST00000412558 336 ntBASIC2.27□□□□□ -2.05
LDB2O43679 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.27□□□□□ -2.05
LDB2O43679 AC003685.2-201ENST00000422795 395 ntBASIC2.27□□□□□ -2.05
LDB2O43679 RNU7-26P-201ENST00000458980 63 ntBASIC2.27□□□□□ -2.05
LDB2O43679 RNU6-625P-201ENST00000459412 107 ntBASIC2.27□□□□□ -2.05
LDB2O43679 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.27□□□□□ -2.05
LDB2O43679 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.27□□□□□ -2.05
LDB2O43679 RNU6-1098P-201ENST00000516772 96 ntBASIC2.27□□□□□ -2.05
LDB2O43679 RNU1-104P-201ENST00000517280 175 ntBASIC2.27□□□□□ -2.05
LDB2O43679 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.27□□□□□ -2.05
LDB2O43679 AK6P2-201ENST00000549020 471 ntBASIC2.27□□□□□ -2.05
LDB2O43679 MIR4423-201ENST00000580922 80 ntBASIC2.27□□□□□ -2.05
LDB2O43679 AC104984.5-201ENST00000586878 94 ntBASIC2.27□□□□□ -2.05
LDB2O43679 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.27□□□□□ -2.05
LDB2O43679 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.27□□□□□ -2.05
LDB2O43679 MIR6715A-201ENST00000615929 79 ntBASIC2.27□□□□□ -2.05
LDB2O43679 AC008873.1-201ENST00000625051 138 ntBASIC2.27□□□□□ -2.05
LDB2O43679 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.27□□□□□ -2.05
LDB2O43679 U6.104-201ENST00000637979 90 ntBASIC2.27□□□□□ -2.05
LDB2O43679 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
LDB2O43679 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.27□□□□□ -2.05
LDB2O43679 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
LDB2O43679 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.27□□□□□ -2.05
LDB2O43679 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LDB2O43679 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.26□□□□□ -2.05
LDB2O43679 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LDB2O43679 AC080100.1-201ENST00000624239 5356 ntBASIC2.26□□□□□ -2.05
LDB2O43679 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LDB2O43679 RNU6-626P-201ENST00000363354 107 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RNU6-234P-201ENST00000365229 104 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RNU6-20P-201ENST00000384106 107 ntBASIC2.26□□□□□ -2.05
LDB2O43679 Y_RNA.461-201ENST00000384263 103 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RNU6-472P-201ENST00000384299 107 ntBASIC2.26□□□□□ -2.05
LDB2O43679 Y_RNA.498-201ENST00000384460 102 ntBASIC2.26□□□□□ -2.05
LDB2O43679 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LDB2O43679 MIR1302-6-201ENST00000408466 90 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RNA5SP504-201ENST00000410676 117 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RNU5A-5P-201ENST00000411054 116 ntBASIC2.26□□□□□ -2.05
LDB2O43679 AC007064.1-201ENST00000412238 351 ntBASIC2.26□□□□□ -2.05
LDB2O43679 RPL21P38-201ENST00000418090 167 ntBASIC2.26□□□□□ -2.05
LDB2O43679 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.26□□□□□ -2.05
LDB2O43679 CR769767.1-201ENST00000436337 346 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms