Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNU6-1322P-201ENST00000364309 107 ntBASIC1□□□□□ -2.25
CHMP2AO43633 Y_RNA.231-201ENST00000364358 102 ntBASIC1□□□□□ -2.25
CHMP2AO43633 SNORD116-9-201ENST00000384000 95 ntBASIC1□□□□□ -2.25
CHMP2AO43633 RNU6-483P-201ENST00000384088 108 ntBASIC1□□□□□ -2.25
CHMP2AO43633 SNORD116-3-201ENST00000384287 95 ntBASIC1□□□□□ -2.25
CHMP2AO43633 SNORA25-201ENST00000384384 134 ntBASIC1□□□□□ -2.25
CHMP2AO43633 SNORD116-7-201ENST00000384404 95 ntBASIC1□□□□□ -2.25
CHMP2AO43633 SNORD116-5-201ENST00000384462 95 ntBASIC1□□□□□ -2.25
CHMP2AO43633 AL590002.1-201ENST00000406554 418 ntBASIC1□□□□□ -2.25
CHMP2AO43633 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1□□□□□ -2.25
CHMP2AO43633 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1□□□□□ -2.25
CHMP2AO43633 AC009237.7-201ENST00000447357 229 ntBASIC1□□□□□ -2.25
CHMP2AO43633 AC079354.2-201ENST00000453523 154 ntBASIC1□□□□□ -2.25
CHMP2AO43633 RNU7-57P-201ENST00000459540 60 ntBASIC1□□□□□ -2.25
CHMP2AO43633 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1□□□□□ -2.25
CHMP2AO43633 TRAPPC2P7-201ENST00000509650 231 ntBASIC1□□□□□ -2.25
CHMP2AO43633 MIR4709-201ENST00000577272 72 ntBASIC1□□□□□ -2.25
CHMP2AO43633 MIR3664-201ENST00000579074 99 ntBASIC1□□□□□ -2.25
CHMP2AO43633 FGF7P1-201ENST00000582820 288 ntBASIC1□□□□□ -2.25
CHMP2AO43633 AL929325.1-201ENST00000603096 117 ntBASIC1□□□□□ -2.25
CHMP2AO43633 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1□□□□□ -2.25
CHMP2AO43633 AC124864.2-201ENST00000624736 186 ntBASIC1□□□□□ -2.25
CHMP2AO43633 Y_RNA.38-201ENST00000362617 102 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 RNU6-254P-201ENST00000363377 107 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 RNU6-1085P-201ENST00000363576 107 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 RNU6-727P-201ENST00000363592 107 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 SNORA12.1-201ENST00000390873 148 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 EIF4E2P1-201ENST00000393781 255 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 RPL21P1-201ENST00000399532 476 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 MIR300-201ENST00000401138 83 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.99□□□□□ -2.25
CHMP2AO43633 MTND1P11-201ENST00000456661 876 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 RNU7-34P-201ENST00000459394 64 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 AC103851.1-201ENST00000506833 274 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 SNORA31.10-201ENST00000516482 106 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 AC016957.1-201ENST00000534895 309 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 AL512360.1-201ENST00000555346 234 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.99□□□□□ -2.25
CHMP2AO43633 AL022345.2-201ENST00000606307 135 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 MIR8076-201ENST00000611401 83 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 AC073534.2-201ENST00000620377 381 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 AL359880.1-201ENST00000621879 266 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 AC027335.2-201ENST00000624030 375 ntBASIC0.99□□□□□ -2.25
CHMP2AO43633 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.99□□□□□ -2.25
CHMP2AO43633 RNU6-1090P-201ENST00000364065 94 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 RNU6-784P-201ENST00000384330 106 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 RNU6-1235P-201ENST00000384559 107 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 RNU6-95P-201ENST00000384697 107 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.98□□□□□ -2.25
CHMP2AO43633 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.98□□□□□ -2.25
CHMP2AO43633 AC069257.2-201ENST00000441819 155 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.98□□□□□ -2.25
CHMP2AO43633 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.98□□□□□ -2.25
CHMP2AO43633 RNU6-498P-201ENST00000459468 107 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 AC007215.1-201ENST00000464893 276 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 MTCO1P29-201ENST00000496868 288 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.98□□□□□ -2.25
CHMP2AO43633 RNU6-948P-201ENST00000516374 107 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 Y_RNA.693-201ENST00000516641 110 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 RNA5SP454-201ENST00000517231 127 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 SUMO2P16-201ENST00000519475 264 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 AC026371.1-201ENST00000551867 419 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 ZNF519P2-201ENST00000557032 169 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 UBL5P4-201ENST00000562584 236 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 FRG2DP-202ENST00000566967 323 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 AC103591.3-201ENST00000608684 209 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 AL133215.3-201ENST00000609801 448 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 AL353149.1-201ENST00000610667 244 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.98□□□□□ -2.25
CHMP2AO43633 AC137590.2-201ENST00000619709 240 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 AL391516.1-201ENST00000554380 2449 ntBASIC0.98□□□□□ -2.25
CHMP2AO43633 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.97□□□□□ -2.25
CHMP2AO43633 RNU6-214P-201ENST00000384130 107 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 MIR32-201ENST00000384965 70 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
CHMP2AO43633 RPS26P42-201ENST00000413485 326 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.97□□□□□ -2.25
CHMP2AO43633 MTCO1P20-201ENST00000425366 358 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 RNU7-66P-201ENST00000459469 62 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 HMGN1P12-201ENST00000499125 195 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 AC019235.1-201ENST00000503847 207 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.97□□□□□ -2.25
CHMP2AO43633 MTND1P5-201ENST00000517906 940 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 MTND2P38-201ENST00000522536 667 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.97□□□□□ -2.25
CHMP2AO43633 AC022217.4-201ENST00000604389 163 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 FAM71BP1-201ENST00000604431 523 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 RPL17P51-201ENST00000605218 238 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 AF250324.2-201ENST00000608299 610 ntBASIC0.97□□□□□ -2.25
CHMP2AO43633 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHMP2AO43633 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
CHMP2AO43633 RNU6-790P-201ENST00000384479 105 ntBASIC0.96□□□□□ -2.26
CHMP2AO43633 RNU6-306P-201ENST00000384617 107 ntBASIC0.96□□□□□ -2.26
CHMP2AO43633 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.96□□□□□ -2.26
CHMP2AO43633 RPL30P16-201ENST00000419341 429 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms