Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNA5SP454-201ENST00000517231 127 ntBASIC0.44□□□□□ -2.34
SGCEO43556 AC087854.1-201ENST00000519706 414 ntBASIC0.44□□□□□ -2.34
SGCEO43556 MTND4P7-201ENST00000523876 130 ntBASIC0.44□□□□□ -2.34
SGCEO43556 HIF1AP1-201ENST00000553642 175 ntBASIC0.44□□□□□ -2.34
SGCEO43556 MIR5000-201ENST00000577717 103 ntBASIC0.44□□□□□ -2.34
SGCEO43556 AC008536.2-201ENST00000607284 349 ntBASIC0.44□□□□□ -2.34
SGCEO43556 AL360219.1-201ENST00000610230 366 ntBASIC0.44□□□□□ -2.34
SGCEO43556 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.44□□□□□ -2.34
SGCEO43556 OR5AK4P-201ENST00000635912 903 ntBASIC0.44□□□□□ -2.34
SGCEO43556 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
SGCEO43556 RNA5SP347-201ENST00000362445 119 ntBASIC0.43□□□□□ -2.34
SGCEO43556 RNU6-1120P-201ENST00000362988 108 ntBASIC0.43□□□□□ -2.34
SGCEO43556 RNU6-1317P-201ENST00000364582 104 ntBASIC0.43□□□□□ -2.34
SGCEO43556 Y_RNA.265-201ENST00000364677 108 ntBASIC0.43□□□□□ -2.34
SGCEO43556 MIR1185-2-201ENST00000408687 86 ntBASIC0.43□□□□□ -2.34
SGCEO43556 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.43□□□□□ -2.34
SGCEO43556 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.43□□□□□ -2.34
SGCEO43556 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.43□□□□□ -2.34
SGCEO43556 AF186996.7-201ENST00000492781 209 ntBASIC0.43□□□□□ -2.34
SGCEO43556 RNU6-430P-201ENST00000517078 107 ntBASIC0.43□□□□□ -2.34
SGCEO43556 MTND1P35-201ENST00000526739 508 ntBASIC0.43□□□□□ -2.34
SGCEO43556 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.43□□□□□ -2.34
SGCEO43556 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.43□□□□□ -2.34
SGCEO43556 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.43□□□□□ -2.34
SGCEO43556 SCOCP1-201ENST00000554676 349 ntBASIC0.43□□□□□ -2.34
SGCEO43556 Z83818.1-201ENST00000603584 150 ntBASIC0.43□□□□□ -2.34
SGCEO43556 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
SGCEO43556 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.42□□□□□ -2.34
SGCEO43556 AL049545.1-201ENST00000401856 572 ntBASIC0.42□□□□□ -2.34
SGCEO43556 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.42□□□□□ -2.34
SGCEO43556 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.42□□□□□ -2.34
SGCEO43556 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.42□□□□□ -2.34
SGCEO43556 RNU7-180P-201ENST00000459240 63 ntBASIC0.42□□□□□ -2.34
SGCEO43556 U7.7-201ENST00000459276 60 ntBASIC0.42□□□□□ -2.34
SGCEO43556 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.42□□□□□ -2.34
SGCEO43556 Y_RNA.676-201ENST00000516393 96 ntBASIC0.42□□□□□ -2.34
SGCEO43556 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.42□□□□□ -2.34
SGCEO43556 MIR5583-1-201ENST00000580941 59 ntBASIC0.42□□□□□ -2.34
SGCEO43556 AC004832.4-201ENST00000608952 331 ntBASIC0.42□□□□□ -2.34
SGCEO43556 AC064836.2-201ENST00000609491 462 ntBASIC0.42□□□□□ -2.34
SGCEO43556 FER-210ENST00000628534 558 ntTSL 5 BASIC0.42□□□□□ -2.34
SGCEO43556 RNA5SP499-201ENST00000363982 119 ntBASIC0.41□□□□□ -2.34
SGCEO43556 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.41□□□□□ -2.34
SGCEO43556 MIR562-201ENST00000384894 95 ntBASIC0.41□□□□□ -2.34
SGCEO43556 RNA5SP219-201ENST00000390940 113 ntBASIC0.41□□□□□ -2.34
SGCEO43556 U8.16-201ENST00000391279 133 ntBASIC0.41□□□□□ -2.34
SGCEO43556 RNA5SP504-201ENST00000410676 117 ntBASIC0.41□□□□□ -2.34
SGCEO43556 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
SGCEO43556 CALM2P4-201ENST00000430810 426 ntBASIC0.41□□□□□ -2.34
SGCEO43556 AC092628.1-201ENST00000436250 252 ntBASIC0.41□□□□□ -2.34
SGCEO43556 TPT1P7-201ENST00000458300 517 ntBASIC0.41□□□□□ -2.34
SGCEO43556 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.41□□□□□ -2.34
SGCEO43556 MTND3P3-201ENST00000505004 126 ntBASIC0.41□□□□□ -2.34
SGCEO43556 RNU6-1198P-201ENST00000516904 67 ntBASIC0.41□□□□□ -2.34
SGCEO43556 AC027419.1-201ENST00000522976 328 ntBASIC0.41□□□□□ -2.34
SGCEO43556 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.41□□□□□ -2.34
SGCEO43556 AL391903.3-201ENST00000612158 163 ntBASIC0.41□□□□□ -2.34
SGCEO43556 AC016597.2-201ENST00000613256 341 ntBASIC0.41□□□□□ -2.34
SGCEO43556 uc_338.34-201ENST00000617467 174 ntBASIC0.41□□□□□ -2.34
SGCEO43556 AC027514.1-201ENST00000588561 1603 ntBASIC0.41□□□□□ -2.34
SGCEO43556 AL390237.1-201ENST00000404226 1415 ntBASIC0.4□□□□□ -2.34
SGCEO43556 RNU6-297P-201ENST00000384636 107 ntBASIC0.4□□□□□ -2.35
SGCEO43556 CYCSP46-201ENST00000423569 204 ntBASIC0.4□□□□□ -2.35
SGCEO43556 AC233266.1-201ENST00000454518 96 ntBASIC0.4□□□□□ -2.35
SGCEO43556 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.4□□□□□ -2.35
SGCEO43556 MTND1P22-201ENST00000510572 951 ntBASIC0.4□□□□□ -2.35
SGCEO43556 AC091133.4-201ENST00000511142 308 ntBASIC0.4□□□□□ -2.35
SGCEO43556 RNU6-1129P-201ENST00000515964 104 ntBASIC0.4□□□□□ -2.35
SGCEO43556 RNU7-12P-201ENST00000516030 62 ntBASIC0.4□□□□□ -2.35
SGCEO43556 RNU6-229P-201ENST00000516614 102 ntBASIC0.4□□□□□ -2.35
SGCEO43556 RNU6-1223P-201ENST00000517124 104 ntBASIC0.4□□□□□ -2.35
SGCEO43556 MTND1P5-201ENST00000517906 940 ntBASIC0.4□□□□□ -2.35
SGCEO43556 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.4□□□□□ -2.35
SGCEO43556 AC010620.1-201ENST00000601088 1102 ntBASIC0.4□□□□□ -2.35
SGCEO43556 AL078603.1-201ENST00000603824 313 ntBASIC0.4□□□□□ -2.35
SGCEO43556 MIR8076-201ENST00000611401 83 ntBASIC0.4□□□□□ -2.35
SGCEO43556 AC242852.1-201ENST00000612151 96 ntBASIC0.4□□□□□ -2.35
SGCEO43556 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
SGCEO43556 AC244015.1-201ENST00000622301 99 ntBASIC0.4□□□□□ -2.35
SGCEO43556 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.39□□□□□ -2.35
SGCEO43556 AL442644.1-201ENST00000454390 3105 ntBASIC0.39□□□□□ -2.35
SGCEO43556 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SGCEO43556 RNU6-1329P-201ENST00000365664 107 ntBASIC0.39□□□□□ -2.35
SGCEO43556 RNU6-784P-201ENST00000384330 106 ntBASIC0.39□□□□□ -2.35
SGCEO43556 RNU5A-2P-201ENST00000384337 116 ntBASIC0.39□□□□□ -2.35
SGCEO43556 MIR10B-201ENST00000385011 110 ntBASIC0.39□□□□□ -2.35
SGCEO43556 SNORD99-201ENST00000408612 74 ntBASIC0.39□□□□□ -2.35
SGCEO43556 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.39□□□□□ -2.35
SGCEO43556 AC092423.1-201ENST00000430165 186 ntBASIC0.39□□□□□ -2.35
SGCEO43556 HSFY5P-201ENST00000453726 309 ntBASIC0.39□□□□□ -2.35
SGCEO43556 SNRPGP9-201ENST00000456025 225 ntBASIC0.39□□□□□ -2.35
SGCEO43556 RPL23AP75-201ENST00000491601 451 ntBASIC0.39□□□□□ -2.35
SGCEO43556 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.39□□□□□ -2.35
SGCEO43556 FRG2DP-202ENST00000566967 323 ntBASIC0.39□□□□□ -2.35
SGCEO43556 MIR4438-201ENST00000585271 93 ntBASIC0.39□□□□□ -2.35
SGCEO43556 AL512605.2-201ENST00000592972 256 ntBASIC0.39□□□□□ -2.35
SGCEO43556 AC234772.3-201ENST00000602277 528 ntBASIC0.39□□□□□ -2.35
SGCEO43556 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.39□□□□□ -2.35
SGCEO43556 HULC.1-201ENST00000612720 240 ntBASIC0.39□□□□□ -2.35
SGCEO43556 AC006435.5-201ENST00000624486 112 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms