Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.22□□□□□ -1.73
HOXA2O43364 MIR3117-201ENST00000584034 78 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 AC019176.2-201ENST00000611579 315 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 AC002064.3-201ENST00000623448 346 ntBASIC4.22□□□□□ -1.73
HOXA2O43364 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA2O43364 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA2O43364 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HOXA2O43364 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA2O43364 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HOXA2O43364 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HOXA2O43364 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA2O43364 SNORA11.1-201ENST00000408133 129 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 RNA5SP136-201ENST00000410906 107 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 AC083863.1-201ENST00000438811 231 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 AL133162.1-201ENST00000463228 453 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 IGKV1-22-201ENST00000524313 326 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 AC007012.1-201ENST00000567192 175 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 MIR3129-201ENST00000581095 76 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 U6.73-201ENST00000619194 103 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 AC009093.8-201ENST00000641769 292 ntBASIC4.21□□□□□ -1.74
HOXA2O43364 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA2O43364 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HOXA2O43364 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXA2O43364 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA2O43364 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA2O43364 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA2O43364 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA2O43364 RNU6-766P-201ENST00000362478 107 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 RNU6-1083P-201ENST00000384022 107 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 MIR570-201ENST00000384917 97 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXA2O43364 DBIP2-201ENST00000419076 262 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 AC018634.1-201ENST00000437554 401 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 AC069285.2-201ENST00000440210 275 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 RPS26P28-201ENST00000470806 348 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 RNU6-113P-201ENST00000516653 101 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 RNU6-586P-201ENST00000517265 104 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.2□□□□□ -1.74
HOXA2O43364 MIR5187-201ENST00000583479 76 ntBASIC4.2□□□□□ -1.74
HOXA2O43364 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
HOXA2O43364 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA2O43364 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXA2O43364 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXA2O43364 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.19□□□□□ -1.74
HOXA2O43364 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
HOXA2O43364 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA2O43364 Y_RNA.85-201ENST00000363014 111 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 MIR199A2-201ENST00000385289 110 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 SNORD12C-201ENST00000386307 89 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA2O43364 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.19□□□□□ -1.74
HOXA2O43364 AL031183.1-201ENST00000457667 207 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 RNU7-170P-201ENST00000459303 61 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 RAC1P2-201ENST00000511164 579 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 RNA5SP236-201ENST00000516169 116 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 PRELID2P1-201ENST00000552837 301 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HOXA2O43364 CYP4A43P-201ENST00000568156 121 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.19□□□□□ -1.74
HOXA2O43364 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HOXA2O43364 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.19□□□□□ -1.74
HOXA2O43364 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
HOXA2O43364 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
HOXA2O43364 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
HOXA2O43364 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
HOXA2O43364 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
HOXA2O43364 RNU6-1292P-201ENST00000383856 107 ntBASIC4.18□□□□□ -1.74
HOXA2O43364 RNU6-756P-201ENST00000383997 107 ntBASIC4.18□□□□□ -1.74
HOXA2O43364 SNORD72-201ENST00000390994 80 ntBASIC4.18□□□□□ -1.74
HOXA2O43364 MIR1302-5-201ENST00000408164 150 ntBASIC4.18□□□□□ -1.74
HOXA2O43364 AC093663.1-201ENST00000497190 394 ntBASIC4.18□□□□□ -1.74
HOXA2O43364 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.18□□□□□ -1.74
HOXA2O43364 MRPS36P2-201ENST00000512569 299 ntBASIC4.18□□□□□ -1.74
HOXA2O43364 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.18□□□□□ -1.74
HOXA2O43364 AC012314.7-201ENST00000619693 93 ntBASIC4.18□□□□□ -1.74
HOXA2O43364 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.18□□□□□ -1.74
HOXA2O43364 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
HOXA2O43364 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA2O43364 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
HOXA2O43364 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.17□□□□□ -1.74
HOXA2O43364 MIR208A-201ENST00000362287 71 ntBASIC4.17□□□□□ -1.74
HOXA2O43364 MIR520G-201ENST00000385064 90 ntBASIC4.17□□□□□ -1.74
HOXA2O43364 AC007064.1-201ENST00000412238 351 ntBASIC4.17□□□□□ -1.74
HOXA2O43364 CALM2P4-201ENST00000430810 426 ntBASIC4.17□□□□□ -1.74
HOXA2O43364 SCARNA14-201ENST00000516903 136 ntBASIC4.17□□□□□ -1.74
HOXA2O43364 RNU6-1096P-201ENST00000517089 102 ntBASIC4.17□□□□□ -1.74
HOXA2O43364 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4.17□□□□□ -1.74
HOXA2O43364 AC107294.3-201ENST00000609211 526 ntBASIC4.17□□□□□ -1.74
HOXA2O43364 AL591424.2-201ENST00000617023 128 ntBASIC4.17□□□□□ -1.74
HOXA2O43364 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
HOXA2O43364 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.17□□□□□ -1.74
HOXA2O43364 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
HOXA2O43364 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
HOXA2O43364 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HOXA2O43364 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HOXA2O43364 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
HOXA2O43364 Y_RNA.163-201ENST00000363702 113 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 SNORA1-201ENST00000384107 130 ntBASIC4.16□□□□□ -1.74
HOXA2O43364 RNU6-905P-201ENST00000384434 107 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms