Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SNORD115-38-201ENST00000365037 82 ntBASIC0.94□□□□□ -2.26
CLOCKO15516 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CLOCKO15516 RNA5SP504-201ENST00000410676 117 ntBASIC0.94□□□□□ -2.26
CLOCKO15516 MTND3P16-201ENST00000452205 344 ntBASIC0.94□□□□□ -2.26
CLOCKO15516 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.94□□□□□ -2.26
CLOCKO15516 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.94□□□□□ -2.26
CLOCKO15516 RNA5SP220-201ENST00000516298 104 ntBASIC0.94□□□□□ -2.26
CLOCKO15516 AC008088.1-201ENST00000580993 280 ntBASIC0.94□□□□□ -2.26
CLOCKO15516 AL133215.3-201ENST00000609801 448 ntBASIC0.94□□□□□ -2.26
CLOCKO15516 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.94□□□□□ -2.26
CLOCKO15516 AC121333.1-201ENST00000567488 2709 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 RNU6-1080P-201ENST00000383982 107 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 RNU6-42P-201ENST00000384165 107 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 Y_RNA.481-201ENST00000384373 102 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 RNU6-440P-201ENST00000390882 105 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 MRPL42P3-201ENST00000401492 326 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.93□□□□□ -2.26
CLOCKO15516 MTCO1P20-201ENST00000425366 358 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AC005002.2-201ENST00000438228 269 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 snoU13.18-201ENST00000459483 104 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 RNU6-1198P-201ENST00000516904 67 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 SNORA70.22-201ENST00000517160 124 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.93□□□□□ -2.26
CLOCKO15516 AC016957.1-201ENST00000534895 309 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AC026371.1-201ENST00000551867 419 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AC004584.2-201ENST00000570407 410 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AC119751.7-201ENST00000600494 245 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AC063944.3-201ENST00000609969 533 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 FAM157A-202ENST00000615155 405 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
CLOCKO15516 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
CLOCKO15516 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.92□□□□□ -2.26
CLOCKO15516 RNY1P14-201ENST00000384426 108 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 Y_RNA.553-201ENST00000384670 102 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 MIR520E-201ENST00000384867 87 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 MIR514A2-201ENST00000385131 88 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 MIR514A3-201ENST00000385132 88 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.92□□□□□ -2.26
CLOCKO15516 AC245047.3-201ENST00000429428 127 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 MTCO1P19-201ENST00000443487 500 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 NDUFB4P10-201ENST00000452541 359 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 RPS29P1-201ENST00000465274 159 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.92□□□□□ -2.26
CLOCKO15516 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.92□□□□□ -2.26
CLOCKO15516 AL137100.2-201ENST00000555786 315 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 SNORA4-201ENST00000584302 138 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 FAM106DP-201ENST00000586416 501 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 AL513534.2-201ENST00000603836 250 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 AL513423.1-201ENST00000621695 132 ntBASIC0.92□□□□□ -2.26
CLOCKO15516 SNORD50.1-201ENST00000362987 71 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 U3.8-201ENST00000363675 217 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 SNORD113-7-201ENST00000363762 77 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 MIR222-201ENST00000384992 110 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 AL034345.1-201ENST00000407768 123 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 MIR1185-2-201ENST00000408687 86 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 RNU6-1186P-201ENST00000410429 97 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 RAB28P5-201ENST00000427490 651 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 AL353572.1-201ENST00000442490 417 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.91□□□□□ -2.26
CLOCKO15516 HSPE1P13-201ENST00000451143 297 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 AC092991.1-201ENST00000477176 376 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 UBL5P1-201ENST00000507979 193 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.91□□□□□ -2.26
CLOCKO15516 RNU6-835P-201ENST00000516974 104 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 RNA5SP454-201ENST00000517231 127 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 RNU7-128P-201ENST00000517247 62 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.91□□□□□ -2.26
CLOCKO15516 AC007834.2-201ENST00000536310 343 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 MIR5695-201ENST00000579717 85 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 U6.73-201ENST00000619194 103 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 SNORD3E-202ENST00000627253 216 ntBASIC0.91□□□□□ -2.26
CLOCKO15516 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 RNU1-93P-201ENST00000364704 169 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 RNU4-9P-201ENST00000364951 139 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 Y_RNA.409-201ENST00000383990 98 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 SNORD116-8-201ENST00000384365 95 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 AL590002.1-201ENST00000406554 418 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 RNU6-648P-201ENST00000410190 107 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 AC079354.2-201ENST00000453523 154 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
CLOCKO15516 RNU7-99P-201ENST00000516271 62 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 RNU6-113P-201ENST00000516653 101 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 RNU6-58P-201ENST00000517143 103 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.9□□□□□ -2.27
CLOCKO15516 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.9□□□□□ -2.27
CLOCKO15516 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.9□□□□□ -2.27
CLOCKO15516 AC022432.1-201ENST00000595739 310 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 AL162424.1-201ENST00000602325 221 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 AL021879.1-201ENST00000611756 288 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 AC073349.3-201ENST00000617616 186 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 AC078883.4-201ENST00000623218 367 ntBASIC0.9□□□□□ -2.27
CLOCKO15516 SNORD115-32-201ENST00000364079 82 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 Y_RNA.796-201ENST00000364268 102 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 Y_RNA.799-201ENST00000364992 102 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 RNU6-128P-201ENST00000383976 107 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 RNU6-505P-201ENST00000384427 107 ntBASIC0.89□□□□□ -2.27
CLOCKO15516 MIR32-201ENST00000384965 70 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms