Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC092104.1-201ENST00000497346 1441 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 MIR365A-201ENST00000362260 87 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 RNU6-652P-201ENST00000365488 107 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 RNU6-424P-201ENST00000384367 105 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 RNU6-1179P-201ENST00000384667 107 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 MED13P1-201ENST00000428342 171 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 AL392103.1-201ENST00000447000 198 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 AC093850.1-201ENST00000454121 251 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.73□□□□□ -2.53
CHD1O14646 SNRPGP7-201ENST00000469016 106 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.73□□□□□ -2.53
CHD1O14646 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.73□□□□□ -2.53
CHD1O14646 AC021451.1-201ENST00000523498 1129 ntBASIC-0.73□□□□□ -2.53
CHD1O14646 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-0.73□□□□□ -2.53
CHD1O14646 SNORA33-201ENST00000363664 130 ntBASIC-0.74□□□□□ -2.53
CHD1O14646 RNU6-10P-201ENST00000384036 107 ntBASIC-0.74□□□□□ -2.53
CHD1O14646 SNORA8.2-201ENST00000384372 139 ntBASIC-0.74□□□□□ -2.53
CHD1O14646 RNU6-15P-201ENST00000384534 107 ntBASIC-0.74□□□□□ -2.53
CHD1O14646 TIMM9P2-201ENST00000419324 266 ntBASIC-0.74□□□□□ -2.53
CHD1O14646 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.74□□□□□ -2.53
CHD1O14646 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.74□□□□□ -2.53
CHD1O14646 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.74□□□□□ -2.53
CHD1O14646 AL445435.1-201ENST00000604232 665 ntBASIC-0.74□□□□□ -2.53
CHD1O14646 AL359697.1-201ENST00000624879 587 ntBASIC-0.74□□□□□ -2.53
CHD1O14646 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 RNU6-650P-201ENST00000365658 111 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 RNU2-62P-201ENST00000410868 191 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AL590135.1-201ENST00000422215 156 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AC019205.3-201ENST00000424573 156 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AC016700.2-201ENST00000446011 156 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AP000870.1-201ENST00000472927 406 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.75□□□□□ -2.53
CHD1O14646 AC015911.1-201ENST00000495111 156 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AC119751.4-201ENST00000507498 357 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AP001372.4-201ENST00000524889 472 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 MRPS36P4-201ENST00000534436 298 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AC064872.1-201ENST00000604823 1072 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AC083799.1-201ENST00000366451 910 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 MIR520C-201ENST00000385005 87 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 MTCO2P23-201ENST00000425216 680 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.75□□□□□ -2.53
CHD1O14646 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.75□□□□□ -2.53
CHD1O14646 RNA5SP94-201ENST00000516917 108 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.75□□□□□ -2.53
CHD1O14646 LRRC34P1-201ENST00000542742 915 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-0.75□□□□□ -2.53
CHD1O14646 AL355073.2-201ENST00000612106 557 ntBASIC-0.75□□□□□ -2.53
CHD1O14646 RNU6-934P-201ENST00000365154 107 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 MTCO1P17-201ENST00000411522 491 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.76□□□□□ -2.53
CHD1O14646 MTND4LP7-201ENST00000431728 294 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.76□□□□□ -2.53
CHD1O14646 MTCO3P42-201ENST00000509488 518 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 MTCO3P39-201ENST00000514812 518 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 AL512347.1-201ENST00000566420 503 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 AC091304.9-201ENST00000612091 226 ntBASIC-0.76□□□□□ -2.53
CHD1O14646 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 PCNPP3-201ENST00000393579 471 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 AC010975.2-201ENST00000427781 588 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 RPL23AP30-201ENST00000432419 501 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 HSFY7P-201ENST00000432672 318 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 USP9YP28-201ENST00000435142 589 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 HSFY8P-201ENST00000437934 318 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 AC026782.1-201ENST00000512952 449 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 AC078795.3-201ENST00000602913 472 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 AC009994.1-201ENST00000606889 253 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 U4.7-201ENST00000638126 106 ntBASIC-0.77□□□□□ -2.53
CHD1O14646 RNU1-76P-201ENST00000362903 159 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RNU6-960P-201ENST00000364056 120 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 Y_RNA.265-201ENST00000364677 108 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RNU6-384P-201ENST00000364900 104 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RNU6-946P-201ENST00000383878 107 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 SNORD65.1-201ENST00000390889 71 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RNA5SP300-201ENST00000391197 107 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 MTND3P17-201ENST00000416968 344 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 MTND4P15-201ENST00000437913 1033 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RPL17P19-201ENST00000489069 552 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC-0.78□□□□□ -2.53
CHD1O14646 MIR548AO-201ENST00000579992 96 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 AL450270.1-201ENST00000606160 391 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 U3.4-201ENST00000363352 213 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RNY1P7-201ENST00000384743 110 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RNU6-127P-201ENST00000390897 107 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RPS3AP3-201ENST00000411933 242 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.78□□□□□ -2.53
CHD1O14646 RNU6-377P-201ENST00000515965 102 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 RNU7-28P-201ENST00000516759 62 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 AP002453.2-201ENST00000533503 320 ntBASIC-0.78□□□□□ -2.53
CHD1O14646 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC-0.78□□□□□ -2.53
CHD1O14646 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC-0.78□□□□□ -2.53
CHD1O14646 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
CHD1O14646 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC-0.79□□□□□ -2.54
CHD1O14646 RNU7-57P-201ENST00000459540 60 ntBASIC-0.79□□□□□ -2.54
CHD1O14646 RNU7-99P-201ENST00000516271 62 ntBASIC-0.79□□□□□ -2.54
CHD1O14646 MIR5692A1-201ENST00000580523 69 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms