Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SOX1O00570 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX1O00570 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SOX1O00570 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX1O00570 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
SOX1O00570 SNORA75.5-201ENST00000391291 81 ntBASIC3.6□□□□□ -1.83
SOX1O00570 RNU2-52P-201ENST00000410680 190 ntBASIC3.6□□□□□ -1.83
SOX1O00570 HMGN2P9-201ENST00000476875 229 ntBASIC3.6□□□□□ -1.83
SOX1O00570 RN7SKP179-201ENST00000516126 217 ntBASIC3.6□□□□□ -1.83
SOX1O00570 AC008739.2-201ENST00000597006 317 ntBASIC3.6□□□□□ -1.83
SOX1O00570 AP003357.1-201ENST00000604497 148 ntBASIC3.6□□□□□ -1.83
SOX1O00570 AL670379.2-201ENST00000604983 252 ntBASIC3.6□□□□□ -1.83
SOX1O00570 U7.2-201ENST00000607576 63 ntBASIC3.6□□□□□ -1.83
SOX1O00570 uc_338.32-201ENST00000615087 172 ntBASIC3.6□□□□□ -1.83
SOX1O00570 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.6□□□□□ -1.83
SOX1O00570 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.6□□□□□ -1.83
SOX1O00570 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SOX1O00570 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.6□□□□□ -1.83
SOX1O00570 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SOX1O00570 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SOX1O00570 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SOX1O00570 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.59□□□□□ -1.83
SOX1O00570 MAPK10-373ENST00000641983 6772 ntBASIC3.59□□□□□ -1.83
SOX1O00570 AC062016.1-201ENST00000355719 319 ntBASIC3.59□□□□□ -1.83
SOX1O00570 RNU6-1323P-201ENST00000384025 107 ntBASIC3.59□□□□□ -1.83
SOX1O00570 MIR3074-201ENST00000384885 81 ntBASIC3.59□□□□□ -1.83
SOX1O00570 AC097463.2-201ENST00000421074 142 ntBASIC3.59□□□□□ -1.83
SOX1O00570 RPL36AP21-201ENST00000490372 323 ntBASIC3.59□□□□□ -1.83
SOX1O00570 RPL31P61-201ENST00000496160 376 ntBASIC3.59□□□□□ -1.83
SOX1O00570 RNU6-1337P-201ENST00000516525 95 ntBASIC3.59□□□□□ -1.83
SOX1O00570 RNU6-1098P-201ENST00000516772 96 ntBASIC3.59□□□□□ -1.83
SOX1O00570 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.59□□□□□ -1.83
SOX1O00570 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.59□□□□□ -1.83
SOX1O00570 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SOX1O00570 TNPO1P3-201ENST00000436471 2662 ntBASIC3.59□□□□□ -1.83
SOX1O00570 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SOX1O00570 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SOX1O00570 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SOX1O00570 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SOX1O00570 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SOX1O00570 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.58□□□□□ -1.84
SOX1O00570 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.58□□□□□ -1.84
SOX1O00570 Y_RNA.124-201ENST00000363339 93 ntBASIC3.58□□□□□ -1.84
SOX1O00570 Y_RNA.251-201ENST00000364551 99 ntBASIC3.58□□□□□ -1.84
SOX1O00570 SNORA20B-201ENST00000384220 132 ntBASIC3.58□□□□□ -1.84
SOX1O00570 MIR29B2-201ENST00000385055 81 ntBASIC3.58□□□□□ -1.84
SOX1O00570 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SOX1O00570 MIR300-201ENST00000401138 83 ntBASIC3.58□□□□□ -1.84
SOX1O00570 AL355796.1-201ENST00000406706 323 ntBASIC3.58□□□□□ -1.84
SOX1O00570 RNA5SP184-201ENST00000411071 108 ntBASIC3.58□□□□□ -1.84
SOX1O00570 AL353705.1-201ENST00000433468 480 ntBASIC3.58□□□□□ -1.84
SOX1O00570 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.58□□□□□ -1.84
SOX1O00570 AL109933.2-201ENST00000452651 260 ntBASIC3.58□□□□□ -1.84
SOX1O00570 RNU7-57P-201ENST00000459540 60 ntBASIC3.58□□□□□ -1.84
SOX1O00570 RPS27P26-201ENST00000494583 239 ntBASIC3.58□□□□□ -1.84
SOX1O00570 RNU7-116P-201ENST00000516940 62 ntBASIC3.58□□□□□ -1.84
SOX1O00570 SNORA31.21-201ENST00000517180 77 ntBASIC3.58□□□□□ -1.84
SOX1O00570 POLR3GP1-201ENST00000594073 261 ntBASIC3.58□□□□□ -1.84
SOX1O00570 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.58□□□□□ -1.84
SOX1O00570 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.58□□□□□ -1.84
SOX1O00570 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.58□□□□□ -1.84
SOX1O00570 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SOX1O00570 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SOX1O00570 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SOX1O00570 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SOX1O00570 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SOX1O00570 CENPCP1-201ENST00000533085 2578 ntBASIC3.57□□□□□ -1.84
SOX1O00570 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.57□□□□□ -1.84
SOX1O00570 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SOX1O00570 AC006504.1-201ENST00000562493 3666 ntBASIC3.57□□□□□ -1.84
SOX1O00570 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SOX1O00570 RNU6-271P-201ENST00000363858 105 ntBASIC3.57□□□□□ -1.84
SOX1O00570 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SOX1O00570 SNORA79-201ENST00000408376 140 ntBASIC3.57□□□□□ -1.84
SOX1O00570 MIR1278-201ENST00000408753 81 ntBASIC3.57□□□□□ -1.84
SOX1O00570 EIF4EP4-201ENST00000424916 578 ntBASIC3.57□□□□□ -1.84
SOX1O00570 AL139132.1-201ENST00000431587 344 ntBASIC3.57□□□□□ -1.84
SOX1O00570 AL135938.1-201ENST00000443141 297 ntBASIC3.57□□□□□ -1.84
SOX1O00570 SNRPGP8-201ENST00000454064 226 ntBASIC3.57□□□□□ -1.84
SOX1O00570 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.57□□□□□ -1.84
SOX1O00570 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SOX1O00570 AC090049.2-201ENST00000550377 109 ntBASIC3.57□□□□□ -1.84
SOX1O00570 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.57□□□□□ -1.84
SOX1O00570 ELOCP29-201ENST00000588193 334 ntBASIC3.57□□□□□ -1.84
SOX1O00570 AC005972.2-201ENST00000604690 348 ntBASIC3.57□□□□□ -1.84
SOX1O00570 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
SOX1O00570 AC006111.3-201ENST00000622137 383 ntBASIC3.57□□□□□ -1.84
SOX1O00570 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.56□□□□□ -1.84
SOX1O00570 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.56□□□□□ -1.84
SOX1O00570 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SOX1O00570 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SOX1O00570 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SOX1O00570 SNORA27.1-201ENST00000362604 124 ntBASIC3.56□□□□□ -1.84
SOX1O00570 RNU6-597P-201ENST00000365620 102 ntBASIC3.56□□□□□ -1.84
SOX1O00570 RNA5SP496-201ENST00000391240 109 ntBASIC3.56□□□□□ -1.84
SOX1O00570 MIR1283-1-201ENST00000408494 87 ntBASIC3.56□□□□□ -1.84
SOX1O00570 EEF1A1P41-201ENST00000414667 207 ntBASIC3.56□□□□□ -1.84
SOX1O00570 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.56□□□□□ -1.84
SOX1O00570 TRBV12-2-201ENST00000489763 344 ntBASIC3.56□□□□□ -1.84
SOX1O00570 AC010598.1-201ENST00000510378 103 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms