Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.77□□□□□ -2.13
RTCAO00442 RNU6-498P-201ENST00000459468 107 ntBASIC1.77□□□□□ -2.13
RTCAO00442 SNORD19B-201ENST00000459623 84 ntBASIC1.77□□□□□ -2.13
RTCAO00442 AC010531.2-201ENST00000465012 153 ntBASIC1.77□□□□□ -2.13
RTCAO00442 AC114982.1-201ENST00000469402 321 ntBASIC1.77□□□□□ -2.13
RTCAO00442 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.77□□□□□ -2.13
RTCAO00442 RNU6-856P-201ENST00000516959 98 ntBASIC1.77□□□□□ -2.13
RTCAO00442 MIR2355-201ENST00000517199 87 ntBASIC1.77□□□□□ -2.13
RTCAO00442 CYCSP23-201ENST00000519781 313 ntBASIC1.77□□□□□ -2.13
RTCAO00442 RRN3P3-201ENST00000549207 578 ntBASIC1.77□□□□□ -2.13
RTCAO00442 AC090617.3-201ENST00000573670 475 ntBASIC1.77□□□□□ -2.13
RTCAO00442 SNORD11B-201ENST00000607707 90 ntBASIC1.77□□□□□ -2.13
RTCAO00442 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.77□□□□□ -2.13
RTCAO00442 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.76□□□□□ -2.13
RTCAO00442 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
RTCAO00442 RNU6-874P-201ENST00000362390 105 ntBASIC1.76□□□□□ -2.13
RTCAO00442 RNU6-890P-201ENST00000384121 107 ntBASIC1.76□□□□□ -2.13
RTCAO00442 RNU6-975P-201ENST00000384296 105 ntBASIC1.76□□□□□ -2.13
RTCAO00442 RNA5SP504-201ENST00000410676 117 ntBASIC1.76□□□□□ -2.13
RTCAO00442 AC007098.1-201ENST00000420122 367 ntBASIC1.76□□□□□ -2.13
RTCAO00442 AF228730.4-201ENST00000421457 183 ntBASIC1.76□□□□□ -2.13
RTCAO00442 OOSP1P1-201ENST00000423265 274 ntBASIC1.76□□□□□ -2.13
RTCAO00442 USP9YP16-201ENST00000430287 407 ntBASIC1.76□□□□□ -2.13
RTCAO00442 SNRPEP8-201ENST00000442866 260 ntBASIC1.76□□□□□ -2.13
RTCAO00442 USP9YP23-201ENST00000455085 407 ntBASIC1.76□□□□□ -2.13
RTCAO00442 UBL5P3-201ENST00000475112 231 ntBASIC1.76□□□□□ -2.13
RTCAO00442 HMGN2P9-201ENST00000476875 229 ntBASIC1.76□□□□□ -2.13
RTCAO00442 RN7SL429P-201ENST00000479090 223 ntBASIC1.76□□□□□ -2.13
RTCAO00442 RN7SL489P-201ENST00000486185 223 ntBASIC1.76□□□□□ -2.13
RTCAO00442 RN7SL327P-201ENST00000488659 223 ntBASIC1.76□□□□□ -2.13
RTCAO00442 RPS29P11-201ENST00000496507 171 ntBASIC1.76□□□□□ -2.13
RTCAO00442 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.76□□□□□ -2.13
RTCAO00442 SNORA25.14-201ENST00000516481 132 ntBASIC1.76□□□□□ -2.13
RTCAO00442 SNORA31.17-201ENST00000516953 127 ntBASIC1.76□□□□□ -2.13
RTCAO00442 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.76□□□□□ -2.13
RTCAO00442 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.76□□□□□ -2.13
RTCAO00442 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.76□□□□□ -2.13
RTCAO00442 AC004584.2-201ENST00000570407 410 ntBASIC1.76□□□□□ -2.13
RTCAO00442 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
RTCAO00442 MIR3945-201ENST00000581853 98 ntBASIC1.76□□□□□ -2.13
RTCAO00442 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.76□□□□□ -2.13
RTCAO00442 RN7SL853P-201ENST00000617250 223 ntBASIC1.76□□□□□ -2.13
RTCAO00442 AC068205.3-201ENST00000636385 468 ntBASIC1.76□□□□□ -2.13
RTCAO00442 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
RTCAO00442 ZNF355P-201ENST00000427301 3216 ntBASIC1.76□□□□□ -2.13
RTCAO00442 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RTCAO00442 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
RTCAO00442 RNU6-490P-201ENST00000362985 107 ntBASIC1.75□□□□□ -2.13
RTCAO00442 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
RTCAO00442 RNU6-793P-201ENST00000384233 104 ntBASIC1.75□□□□□ -2.13
RTCAO00442 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RTCAO00442 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
RTCAO00442 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.75□□□□□ -2.13
RTCAO00442 EBAG9P1-201ENST00000418955 543 ntBASIC1.75□□□□□ -2.13
RTCAO00442 MTCO2P27-201ENST00000420740 428 ntBASIC1.75□□□□□ -2.13
RTCAO00442 FTH1P12-201ENST00000432137 551 ntBASIC1.75□□□□□ -2.13
RTCAO00442 UBE2V1P7-201ENST00000446395 340 ntBASIC1.75□□□□□ -2.13
RTCAO00442 MTCO3P10-201ENST00000455912 772 ntBASIC1.75□□□□□ -2.13
RTCAO00442 Y_RNA.632-201ENST00000459189 102 ntBASIC1.75□□□□□ -2.13
RTCAO00442 AC010409.1-201ENST00000487382 476 ntBASIC1.75□□□□□ -2.13
RTCAO00442 RNU6-470P-201ENST00000515954 104 ntBASIC1.75□□□□□ -2.13
RTCAO00442 RNU6-948P-201ENST00000516374 107 ntBASIC1.75□□□□□ -2.13
RTCAO00442 SUMO2P18-201ENST00000518873 252 ntBASIC1.75□□□□□ -2.13
RTCAO00442 RAB11AP2-201ENST00000545905 639 ntBASIC1.75□□□□□ -2.13
RTCAO00442 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.75□□□□□ -2.13
RTCAO00442 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
RTCAO00442 MIR4753-201ENST00000585119 83 ntBASIC1.75□□□□□ -2.13
RTCAO00442 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.75□□□□□ -2.13
RTCAO00442 RNU6-545P-201ENST00000362681 104 ntBASIC1.74□□□□□ -2.13
RTCAO00442 Y_RNA.132-201ENST00000363421 102 ntBASIC1.74□□□□□ -2.13
RTCAO00442 RNU6-112P-201ENST00000363599 104 ntBASIC1.74□□□□□ -2.13
RTCAO00442 Y_RNA.187-201ENST00000363918 113 ntBASIC1.74□□□□□ -2.13
RTCAO00442 Y_RNA.259-201ENST00000364619 101 ntBASIC1.74□□□□□ -2.13
RTCAO00442 MIR549A-201ENST00000385268 96 ntBASIC1.74□□□□□ -2.13
RTCAO00442 SNORA40.18-201ENST00000391200 128 ntBASIC1.74□□□□□ -2.13
RTCAO00442 RNU1-78P-201ENST00000391248 165 ntBASIC1.74□□□□□ -2.13
RTCAO00442 SUMO2P12-201ENST00000405924 140 ntBASIC1.74□□□□□ -2.13
RTCAO00442 AL353997.1-201ENST00000432936 108 ntBASIC1.74□□□□□ -2.13
RTCAO00442 AC236972.2-201ENST00000434979 310 ntBASIC1.74□□□□□ -2.13
RTCAO00442 AC074290.1-201ENST00000448883 135 ntBASIC1.74□□□□□ -2.13
RTCAO00442 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
RTCAO00442 HMGN1P13-201ENST00000505795 138 ntBASIC1.74□□□□□ -2.13
RTCAO00442 RNU6-970P-201ENST00000516312 107 ntBASIC1.74□□□□□ -2.13
RTCAO00442 RNU6-264P-201ENST00000517134 104 ntBASIC1.74□□□□□ -2.13
RTCAO00442 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.74□□□□□ -2.13
RTCAO00442 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.74□□□□□ -2.13
RTCAO00442 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.74□□□□□ -2.13
RTCAO00442 AL353149.1-201ENST00000610667 244 ntBASIC1.74□□□□□ -2.13
RTCAO00442 AC126177.8-201ENST00000618339 1015 ntBASIC1.74□□□□□ -2.13
RTCAO00442 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
RTCAO00442 AC112487.2-201ENST00000637950 304 ntBASIC1.74□□□□□ -2.13
RTCAO00442 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.73□□□□□ -2.13
RTCAO00442 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
RTCAO00442 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.73□□□□□ -2.13
RTCAO00442 U3.8-201ENST00000363675 217 ntBASIC1.73□□□□□ -2.13
RTCAO00442 Y_RNA.356-201ENST00000365475 113 ntBASIC1.73□□□□□ -2.13
RTCAO00442 MIR9-3-201ENST00000385084 90 ntBASIC1.73□□□□□ -2.13
RTCAO00442 MIR559-201ENST00000385188 96 ntBASIC1.73□□□□□ -2.13
RTCAO00442 AC139712.2-201ENST00000424302 339 ntBASIC1.73□□□□□ -2.13
RTCAO00442 AC091179.3-201ENST00000474761 144 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms