Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC009237.7-201ENST00000447357 229 ntBASIC1.89□□□□□ -2.11
O00370 RNU7-169P-201ENST00000459456 61 ntBASIC1.89□□□□□ -2.11
O00370 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.89□□□□□ -2.11
O00370 Y_RNA.718-201ENST00000517110 102 ntBASIC1.89□□□□□ -2.11
O00370 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.89□□□□□ -2.11
O00370 RRN3P3-201ENST00000549207 578 ntBASIC1.89□□□□□ -2.11
O00370 MIR4419B-201ENST00000577260 68 ntBASIC1.89□□□□□ -2.11
O00370 RNU6-874P-201ENST00000362390 105 ntBASIC1.88□□□□□ -2.11
O00370 RNY3P11-201ENST00000364153 102 ntBASIC1.88□□□□□ -2.11
O00370 RNU6-879P-201ENST00000364328 108 ntBASIC1.88□□□□□ -2.11
O00370 SNORD31B-201ENST00000364977 69 ntBASIC1.88□□□□□ -2.11
O00370 Y_RNA.358-201ENST00000365491 99 ntBASIC1.88□□□□□ -2.11
O00370 RNU6-418P-201ENST00000384035 107 ntBASIC1.88□□□□□ -2.11
O00370 RNU6-160P-201ENST00000384591 107 ntBASIC1.88□□□□□ -2.11
O00370 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.88□□□□□ -2.11
O00370 AC236972.2-201ENST00000434979 310 ntBASIC1.88□□□□□ -2.11
O00370 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.88□□□□□ -2.11
O00370 AC016717.1-201ENST00000448918 286 ntBASIC1.88□□□□□ -2.11
O00370 AC007215.1-201ENST00000464893 276 ntBASIC1.88□□□□□ -2.11
O00370 RPL23AP63-201ENST00000498752 471 ntBASIC1.88□□□□□ -2.11
O00370 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
O00370 RNU6-295P-201ENST00000516901 104 ntBASIC1.88□□□□□ -2.11
O00370 RNU6-1198P-201ENST00000516904 67 ntBASIC1.88□□□□□ -2.11
O00370 RNU6-548P-201ENST00000517083 115 ntBASIC1.88□□□□□ -2.11
O00370 AC022868.1-201ENST00000517767 391 ntBASIC1.88□□□□□ -2.11
O00370 AC126177.8-201ENST00000618339 1015 ntBASIC1.88□□□□□ -2.11
O00370 BX322639.1-202ENST00000423987 2213 ntBASIC1.88□□□□□ -2.11
O00370 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
O00370 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
O00370 SNORD87-201ENST00000364849 89 ntBASIC1.87□□□□□ -2.11
O00370 Y_RNA.314-201ENST00000365114 102 ntBASIC1.87□□□□□ -2.11
O00370 MIR1283-1-201ENST00000408494 87 ntBASIC1.87□□□□□ -2.11
O00370 AC123900.1-201ENST00000420390 96 ntBASIC1.87□□□□□ -2.11
O00370 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.87□□□□□ -2.11
O00370 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.87□□□□□ -2.11
O00370 SNORD19B-201ENST00000459623 84 ntBASIC1.87□□□□□ -2.11
O00370 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.87□□□□□ -2.11
O00370 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
O00370 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.87□□□□□ -2.11
O00370 RAB11AP2-201ENST00000545905 639 ntBASIC1.87□□□□□ -2.11
O00370 AC093023.1-201ENST00000547375 507 ntBASIC1.87□□□□□ -2.11
O00370 MIR5701-3-201ENST00000578890 82 ntBASIC1.87□□□□□ -2.11
O00370 MIR5701-1-201ENST00000585138 82 ntBASIC1.87□□□□□ -2.11
O00370 CYP2C61P-201ENST00000604072 290 ntBASIC1.87□□□□□ -2.11
O00370 RPL17P51-201ENST00000605218 238 ntBASIC1.87□□□□□ -2.11
O00370 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.87□□□□□ -2.11
O00370 MIR5701-2-201ENST00000615634 82 ntBASIC1.87□□□□□ -2.11
O00370 AL353997.5-201ENST00000618886 171 ntBASIC1.87□□□□□ -2.11
O00370 U1.36-201ENST00000620684 176 ntBASIC1.87□□□□□ -2.11
O00370 AC084768.2-201ENST00000622736 221 ntBASIC1.87□□□□□ -2.11
O00370 AL078596.1-201ENST00000624856 447 ntBASIC1.87□□□□□ -2.11
O00370 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.87□□□□□ -2.11
O00370 LINC02555-201ENST00000563933 1951 ntBASIC1.87□□□□□ -2.11
O00370 RNU1-58P-201ENST00000362413 163 ntBASIC1.86□□□□□ -2.11
O00370 RNU6-280P-201ENST00000364145 104 ntBASIC1.86□□□□□ -2.11
O00370 RNU6-1164P-201ENST00000364428 107 ntBASIC1.86□□□□□ -2.11
O00370 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.86□□□□□ -2.11
O00370 Y_RNA.415-201ENST00000384012 112 ntBASIC1.86□□□□□ -2.11
O00370 MIR10B-201ENST00000385011 110 ntBASIC1.86□□□□□ -2.11
O00370 RNU6-159P-201ENST00000391080 106 ntBASIC1.86□□□□□ -2.11
O00370 RNU6-1001P-201ENST00000411265 100 ntBASIC1.86□□□□□ -2.11
O00370 AC022028.1-201ENST00000412054 408 ntBASIC1.86□□□□□ -2.11
O00370 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.86□□□□□ -2.11
O00370 FGF7P4-201ENST00000509595 295 ntBASIC1.86□□□□□ -2.11
O00370 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.86□□□□□ -2.11
O00370 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
O00370 RNU6-470P-201ENST00000515954 104 ntBASIC1.86□□□□□ -2.11
O00370 Y_RNA.661-201ENST00000516003 99 ntBASIC1.86□□□□□ -2.11
O00370 RNU6-1114P-201ENST00000516022 107 ntBASIC1.86□□□□□ -2.11
O00370 RNU6-107P-201ENST00000516643 102 ntBASIC1.86□□□□□ -2.11
O00370 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.86□□□□□ -2.11
O00370 GNAI2P1-201ENST00000541815 315 ntBASIC1.86□□□□□ -2.11
O00370 SNORD11B-201ENST00000607707 90 ntBASIC1.86□□□□□ -2.11
O00370 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.86□□□□□ -2.11
O00370 Y_RNA.179-201ENST00000363844 90 ntBASIC1.85□□□□□ -2.11
O00370 SNORD114-6-201ENST00000364393 72 ntBASIC1.85□□□□□ -2.11
O00370 Y_RNA.332-201ENST00000365271 113 ntBASIC1.85□□□□□ -2.11
O00370 Y_RNA.364-201ENST00000365532 101 ntBASIC1.85□□□□□ -2.11
O00370 MIR625-201ENST00000385047 85 ntBASIC1.85□□□□□ -2.11
O00370 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
O00370 SNORA26.9-201ENST00000391322 122 ntBASIC1.85□□□□□ -2.11
O00370 Y_RNA.604-201ENST00000410574 102 ntBASIC1.85□□□□□ -2.11
O00370 Y_RNA.605-201ENST00000410577 105 ntBASIC1.85□□□□□ -2.11
O00370 CYCSP49-201ENST00000420810 319 ntBASIC1.85□□□□□ -2.11
O00370 MRPS18CP6-201ENST00000423587 223 ntBASIC1.85□□□□□ -2.11
O00370 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.85□□□□□ -2.11
O00370 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
O00370 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.85□□□□□ -2.11
O00370 AC007677.1-201ENST00000445757 515 ntBASIC1.85□□□□□ -2.11
O00370 AC016925.1-201ENST00000458303 298 ntBASIC1.85□□□□□ -2.11
O00370 U8.22-201ENST00000459141 133 ntBASIC1.85□□□□□ -2.11
O00370 AC010531.2-201ENST00000465012 153 ntBASIC1.85□□□□□ -2.11
O00370 AC091179.3-201ENST00000474761 144 ntBASIC1.85□□□□□ -2.11
O00370 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.85□□□□□ -2.11
O00370 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.85□□□□□ -2.11
O00370 AC080078.3-201ENST00000605407 463 ntBASIC1.85□□□□□ -2.11
O00370 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.85□□□□□ -2.11
O00370 AC083806.3-201ENST00000614016 455 ntBASIC1.85□□□□□ -2.11
O00370 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.85□□□□□ -2.11
O00370 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms