Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC245047.7-201ENST00000440265 293 ntBASIC0.74□□□□□ -2.29
DFFAO00273 RPL23AP75-201ENST00000491601 451 ntBASIC0.74□□□□□ -2.29
DFFAO00273 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.74□□□□□ -2.29
DFFAO00273 HMGB1P29-201ENST00000505659 499 ntBASIC0.74□□□□□ -2.29
DFFAO00273 SNORA19.2-201ENST00000516013 114 ntBASIC0.74□□□□□ -2.29
DFFAO00273 RNU6-1038P-201ENST00000516516 104 ntBASIC0.74□□□□□ -2.29
DFFAO00273 RNA5SP168-201ENST00000516642 112 ntBASIC0.74□□□□□ -2.29
DFFAO00273 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.74□□□□□ -2.29
DFFAO00273 CPDP1-201ENST00000579660 283 ntBASIC0.74□□□□□ -2.29
DFFAO00273 AL121757.2-201ENST00000611223 313 ntBASIC0.74□□□□□ -2.29
DFFAO00273 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.74□□□□□ -2.29
DFFAO00273 AC073349.3-201ENST00000617616 186 ntBASIC0.74□□□□□ -2.29
DFFAO00273 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
DFFAO00273 RNU4-76P-201ENST00000364509 141 ntBASIC0.73□□□□□ -2.29
DFFAO00273 Y_RNA.378-201ENST00000365652 113 ntBASIC0.73□□□□□ -2.29
DFFAO00273 RNU6-245P-201ENST00000384020 107 ntBASIC0.73□□□□□ -2.29
DFFAO00273 MIR499A-201ENST00000384903 122 ntBASIC0.73□□□□□ -2.29
DFFAO00273 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.73□□□□□ -2.29
DFFAO00273 AL606489.2-201ENST00000433886 234 ntBASIC0.73□□□□□ -2.29
DFFAO00273 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
DFFAO00273 AC117454.1-201ENST00000491120 168 ntBASIC0.73□□□□□ -2.29
DFFAO00273 MTCO1P29-201ENST00000496868 288 ntBASIC0.73□□□□□ -2.29
DFFAO00273 AC092436.3-201ENST00000511788 257 ntBASIC0.73□□□□□ -2.29
DFFAO00273 ACA64.5-201ENST00000516207 127 ntBASIC0.73□□□□□ -2.29
DFFAO00273 SNORA40.12-201ENST00000516329 111 ntBASIC0.73□□□□□ -2.29
DFFAO00273 AL137100.2-201ENST00000555786 315 ntBASIC0.73□□□□□ -2.29
DFFAO00273 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.73□□□□□ -2.29
DFFAO00273 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
DFFAO00273 AC022432.1-201ENST00000595739 310 ntBASIC0.73□□□□□ -2.29
DFFAO00273 SNORD114-24-201ENST00000365029 72 ntBASIC0.72□□□□□ -2.29
DFFAO00273 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.72□□□□□ -2.29
DFFAO00273 SNORD37.1-201ENST00000390968 65 ntBASIC0.72□□□□□ -2.29
DFFAO00273 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.72□□□□□ -2.29
DFFAO00273 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.72□□□□□ -2.29
DFFAO00273 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.72□□□□□ -2.29
DFFAO00273 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.72□□□□□ -2.29
DFFAO00273 MRPS10P2-201ENST00000431226 381 ntBASIC0.72□□□□□ -2.29
DFFAO00273 Y_RNA.654-201ENST00000497848 106 ntBASIC0.72□□□□□ -2.29
DFFAO00273 SNORD79.1-201ENST00000516069 84 ntBASIC0.72□□□□□ -2.29
DFFAO00273 RNA5SP54-201ENST00000516951 92 ntBASIC0.72□□□□□ -2.29
DFFAO00273 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.72□□□□□ -2.29
DFFAO00273 CYP3A137P-201ENST00000562436 69 ntBASIC0.72□□□□□ -2.29
DFFAO00273 MTATP6P24-201ENST00000576835 677 ntBASIC0.72□□□□□ -2.29
DFFAO00273 AL162424.1-201ENST00000602325 221 ntBASIC0.72□□□□□ -2.29
DFFAO00273 U6.73-201ENST00000619194 103 ntBASIC0.72□□□□□ -2.29
DFFAO00273 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.72□□□□□ -2.29
DFFAO00273 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.71□□□□□ -2.3
DFFAO00273 SNORD115-8-201ENST00000363856 82 ntBASIC0.71□□□□□ -2.3
DFFAO00273 SNORD115-38-201ENST00000365037 82 ntBASIC0.71□□□□□ -2.3
DFFAO00273 RNU6-38P-201ENST00000384085 107 ntBASIC0.71□□□□□ -2.3
DFFAO00273 RNU6-214P-201ENST00000384130 107 ntBASIC0.71□□□□□ -2.3
DFFAO00273 RNU6-17P-201ENST00000384245 107 ntBASIC0.71□□□□□ -2.3
DFFAO00273 RNU6-933P-201ENST00000384424 107 ntBASIC0.71□□□□□ -2.3
DFFAO00273 RNU6-18P-201ENST00000384527 107 ntBASIC0.71□□□□□ -2.3
DFFAO00273 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
DFFAO00273 MIR653-201ENST00000385279 96 ntBASIC0.71□□□□□ -2.3
DFFAO00273 SNORD41-201ENST00000386967 70 ntBASIC0.71□□□□□ -2.3
DFFAO00273 AC114482.1-201ENST00000418010 247 ntBASIC0.71□□□□□ -2.3
DFFAO00273 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
DFFAO00273 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.71□□□□□ -2.3
DFFAO00273 MTCO2P16-201ENST00000436962 677 ntBASIC0.71□□□□□ -2.3
DFFAO00273 AC002429.1-201ENST00000437672 148 ntBASIC0.71□□□□□ -2.3
DFFAO00273 USP9YP29-201ENST00000445112 563 ntBASIC0.71□□□□□ -2.3
DFFAO00273 NDUFB4P10-201ENST00000452541 359 ntBASIC0.71□□□□□ -2.3
DFFAO00273 BET1P1-201ENST00000482276 359 ntBASIC0.71□□□□□ -2.3
DFFAO00273 PDCD5P2-201ENST00000507570 312 ntBASIC0.71□□□□□ -2.3
DFFAO00273 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.71□□□□□ -2.3
DFFAO00273 RNA5SP401-201ENST00000515920 127 ntBASIC0.71□□□□□ -2.3
DFFAO00273 RNU7-99P-201ENST00000516271 62 ntBASIC0.71□□□□□ -2.3
DFFAO00273 AL590705.4-201ENST00000532209 134 ntBASIC0.71□□□□□ -2.3
DFFAO00273 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.71□□□□□ -2.3
DFFAO00273 AL391262.2-201ENST00000622466 494 ntBASIC0.71□□□□□ -2.3
DFFAO00273 Y_RNA.1-201ENST00000352915 104 ntBASIC0.7□□□□□ -2.3
DFFAO00273 Y_RNA.124-201ENST00000363339 93 ntBASIC0.7□□□□□ -2.3
DFFAO00273 Y_RNA.224-201ENST00000364308 111 ntBASIC0.7□□□□□ -2.3
DFFAO00273 RNU4-66P-201ENST00000365199 138 ntBASIC0.7□□□□□ -2.3
DFFAO00273 Y_RNA.363-201ENST00000365529 113 ntBASIC0.7□□□□□ -2.3
DFFAO00273 MIR1185-2-201ENST00000408687 86 ntBASIC0.7□□□□□ -2.3
DFFAO00273 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
DFFAO00273 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.7□□□□□ -2.3
DFFAO00273 MTND5P15-201ENST00000434246 349 ntBASIC0.7□□□□□ -2.3
DFFAO00273 RNU7-94P-201ENST00000459576 63 ntBASIC0.7□□□□□ -2.3
DFFAO00273 MIR4778-201ENST00000577635 80 ntBASIC0.7□□□□□ -2.3
DFFAO00273 AC100830.2-201ENST00000581636 240 ntBASIC0.7□□□□□ -2.3
DFFAO00273 AC073648.5-201ENST00000603502 305 ntBASIC0.7□□□□□ -2.3
DFFAO00273 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.69□□□□□ -2.3
DFFAO00273 AP000568.1-201ENST00000282964 442 ntBASIC0.69□□□□□ -2.3
DFFAO00273 RNU6-199P-201ENST00000362954 107 ntBASIC0.69□□□□□ -2.3
DFFAO00273 U3.8-201ENST00000363675 217 ntBASIC0.69□□□□□ -2.3
DFFAO00273 RNU4-20P-201ENST00000365601 151 ntBASIC0.69□□□□□ -2.3
DFFAO00273 MIR200A-201ENST00000384875 90 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.69□□□□□ -2.3
DFFAO00273 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
DFFAO00273 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.69□□□□□ -2.3
DFFAO00273 AL121579.1-201ENST00000555129 305 ntBASIC0.69□□□□□ -2.3
DFFAO00273 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.69□□□□□ -2.3
DFFAO00273 FRG2DP-202ENST00000566967 323 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
DFFAO00273 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms