Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SNORA67.2-201ENST00000384300 149 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 AC007098.1-201ENST00000420122 367 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 HMGN2P34-201ENST00000437647 269 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.48□□□□□ -2.17
PDLIM1O00151 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 AC026782.1-201ENST00000512952 449 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 AC046134.1-201ENST00000514454 666 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 RNU6-1146P-201ENST00000516282 102 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 AC016925.2-201ENST00000605108 242 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 PRR13P7-201ENST00000605538 430 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 AC100812.1-201ENST00000607622 580 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 AC122108.2-201ENST00000611946 526 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 PISRT1.1-201ENST00000616930 107 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 snoZ196.1-201ENST00000625269 89 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 AC010615.1-201ENST00000594254 1764 ntBASIC1.48□□□□□ -2.17
PDLIM1O00151 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
PDLIM1O00151 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.48□□□□□ -2.17
PDLIM1O00151 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PDLIM1O00151 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
PDLIM1O00151 RNU6-661P-201ENST00000362409 107 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 Y_RNA.179-201ENST00000363844 90 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 RNU6-593P-201ENST00000364716 112 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 SNORD87-201ENST00000364849 89 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 RNU6-601P-201ENST00000384540 107 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 MIR520A-201ENST00000384862 85 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
PDLIM1O00151 Y_RNA.594-201ENST00000410373 140 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 AP000870.1-201ENST00000472927 406 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 RPL36AP21-201ENST00000490372 323 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 Y_RNA.708-201ENST00000516950 96 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 AC084364.2-201ENST00000546924 395 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 MIR5695-201ENST00000579717 85 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 AL355802.3-201ENST00000607571 545 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.47□□□□□ -2.17
PDLIM1O00151 MIR8074-201ENST00000615081 81 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 AC068205.3-201ENST00000636385 468 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
PDLIM1O00151 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.47□□□□□ -2.17
PDLIM1O00151 MTND4P12-201ENST00000498999 1377 ntBASIC1.47□□□□□ -2.17
PDLIM1O00151 MIR424-201ENST00000362227 98 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 RNA5SP190-201ENST00000365222 118 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 RNU6-793P-201ENST00000384233 104 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 MIR548B-201ENST00000385247 97 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
PDLIM1O00151 AL117342.1-201ENST00000404861 406 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.46□□□□□ -2.18
PDLIM1O00151 MTND1P2-201ENST00000430604 821 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 RPL23AP50-201ENST00000434149 455 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 Y_RNA.670-201ENST00000516255 105 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.46□□□□□ -2.18
PDLIM1O00151 AC008873.1-201ENST00000625051 138 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 MIR338-201ENST00000636369 67 ntBASIC1.46□□□□□ -2.18
PDLIM1O00151 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
PDLIM1O00151 RNU1-17P-201ENST00000363022 152 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 Y_RNA.106-201ENST00000363189 100 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 RNU6-414P-201ENST00000363705 104 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 Y_RNA.339-201ENST00000365325 102 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 Y_RNA.415-201ENST00000384012 112 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 Y_RNA.482-201ENST00000384377 111 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 RNU6-296P-201ENST00000384608 107 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 RNU6-417P-201ENST00000384712 107 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 MT-TL1-201ENST00000386347 75 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 RNU6-700P-201ENST00000391043 107 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 RNA5SP504-201ENST00000410676 117 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.45□□□□□ -2.18
PDLIM1O00151 CST2P1-201ENST00000425770 87 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 USP9YP16-201ENST00000430287 407 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 MTND3P23-201ENST00000431980 347 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 USP9YP23-201ENST00000455085 407 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 RNU7-87P-201ENST00000459343 62 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 AC091179.3-201ENST00000474761 144 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 AC103851.1-201ENST00000506833 274 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.45□□□□□ -2.18
PDLIM1O00151 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.45□□□□□ -2.18
PDLIM1O00151 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.45□□□□□ -2.18
PDLIM1O00151 AC009229.3-201ENST00000608056 282 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.45□□□□□ -2.18
PDLIM1O00151 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.45□□□□□ -2.18
PDLIM1O00151 RNU6-845P-201ENST00000362578 103 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 snoU2-30.2-201ENST00000362805 70 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 Y_RNA.67-201ENST00000362870 100 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 RNU6-1240P-201ENST00000365155 104 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 MIR10B-201ENST00000385011 110 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 AC008134.1-201ENST00000420943 193 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.44□□□□□ -2.18
PDLIM1O00151 AL353997.1-201ENST00000432936 108 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 AC245047.4-201ENST00000433189 144 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 HSPE1P9-201ENST00000440046 311 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.44□□□□□ -2.18
PDLIM1O00151 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.44□□□□□ -2.18
PDLIM1O00151 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.44□□□□□ -2.18
PDLIM1O00151 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.44□□□□□ -2.18
PDLIM1O00151 snoU13.9-201ENST00000458927 103 ntBASIC1.44□□□□□ -2.18
PDLIM1O00151 SNORD13-201ENST00000459299 104 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms