Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNU6-45P-201ENST00000384471 107 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNU6-692P-201ENST00000384496 107 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNA5SP467-201ENST00000391274 118 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC139712.2-201ENST00000424302 339 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 MTATP6P26-201ENST00000445926 662 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNU7-63P-201ENST00000459054 62 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 UBL5P1-201ENST00000507979 193 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNA5SP437-201ENST00000517249 129 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 MTND1P35-201ENST00000526739 508 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AK6P2-201ENST00000549020 471 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 SUB1P2-201ENST00000556401 297 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 MIR3169-201ENST00000578032 83 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 MIR4753-201ENST00000585119 83 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AL034555.1-201ENST00000604816 211 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 Z99129.1-201ENST00000612510 255 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AL136221.1-201ENST00000621449 509 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNU1-23P-201ENST00000363361 144 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 SNORA25.8-201ENST00000364831 128 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.372-201ENST00000365599 102 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.490-201ENST00000384413 102 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.504-201ENST00000384481 104 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 SNORA12.2-201ENST00000391040 156 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNA5SP63-201ENST00000391225 112 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1156P-201ENST00000410365 100 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC004866.1-201ENST00000411748 78 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RPS27P16-201ENST00000425758 201 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 RPL23AP6-201ENST00000446637 472 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 HMGN2P9-201ENST00000476875 229 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC022447.4-201ENST00000504053 364 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC079140.2-201ENST00000506193 142 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 SCOCP1-201ENST00000554676 349 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 UBL5P4-201ENST00000562584 236 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 MIR3611-201ENST00000584484 83 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AL365434.2-201ENST00000607979 234 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AL133215.3-201ENST00000609801 448 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AC022079.1-201ENST00000621546 602 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 snoZ196.1-201ENST00000625269 89 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 AL159152.1-201ENST00000635019 2587 ntBASIC0.58□□□□□ -2.32
COL6A6A6NMZ7 BX322639.1-202ENST00000423987 2213 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 SNORD32B-201ENST00000364460 84 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-877P-201ENST00000383868 107 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-418P-201ENST00000384035 107 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 Y_RNA.453-201ENST00000384223 109 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU4-55P-201ENST00000410731 137 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 USP9YP16-201ENST00000430287 407 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 USP9YP23-201ENST00000455085 407 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 snoU13.30-201ENST00000458951 104 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU7-187P-201ENST00000458985 68 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AC010531.2-201ENST00000465012 153 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 TRBVA-201ENST00000498804 316 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNA5SP401-201ENST00000515920 127 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AC109635.3-201ENST00000529536 185 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AP000763.2-201ENST00000540641 163 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AL355802.3-201ENST00000607571 545 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AC137590.2-201ENST00000619709 240 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AL359880.1-201ENST00000621879 266 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 MTND4P5-201ENST00000435821 1374 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-23P-201ENST00000363283 107 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-128P-201ENST00000383976 107 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-214P-201ENST00000384130 107 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1215P-201ENST00000384441 102 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1054P-201ENST00000411293 104 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 UBE2V1P4-201ENST00000425374 344 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AC099677.2-201ENST00000436385 175 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 C1DP4-201ENST00000455429 424 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU7-167P-201ENST00000459160 62 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-1098P-201ENST00000516772 96 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 RNU6-612P-201ENST00000516909 102 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 CENPUP1-201ENST00000526649 1202 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 MIR5696-201ENST00000578474 85 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 MIR5589-201ENST00000579442 60 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AP003465.2-201ENST00000602571 373 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 PRR13P7-201ENST00000605538 430 ntBASIC0.57□□□□□ -2.32
COL6A6A6NMZ7 AC087588.2-201ENST00000617667 426 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms