Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 SNORD114-1-201ENST00000362705 72 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 RNU6-102P-201ENST00000384485 104 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 Y_RNA.541-201ENST00000384640 113 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 AL357139.1-201ENST00000407792 426 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 RNU2-54P-201ENST00000410299 190 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 RNU6-1132P-201ENST00000459214 107 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 RN7SL93P-201ENST00000463035 293 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 AC096725.1-201ENST00000514266 313 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 RNU6-56P-201ENST00000516986 93 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 MIR3671-201ENST00000580455 88 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 AC004467.1-201ENST00000615678 330 ntBASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC85CA6NKD9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 RNU6-283P-201ENST00000364788 107 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 MIR548B-201ENST00000385247 97 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AL138827.1-201ENST00000402666 306 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 RNU6-1199P-201ENST00000411249 104 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AC104389.3-201ENST00000445629 235 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AC011753.1-201ENST00000451001 220 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AC005042.3-201ENST00000453230 174 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AC114982.1-201ENST00000469402 321 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 RNU7-110P-201ENST00000516891 62 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AC091932.3-201ENST00000624223 323 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 MIR7153-201ENST00000637758 57 ntBASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC85CA6NKD9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RNU6-545P-201ENST00000362681 104 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.101-201ENST00000363154 102 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RNU6-1305P-201ENST00000364353 104 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RNU6-1180P-201ENST00000364935 107 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RNU6-1026P-201ENST00000384465 108 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RNU6-21P-201ENST00000384710 107 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 MIR1185-2-201ENST00000408687 86 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.602-201ENST00000410535 92 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RNA5SP475-201ENST00000410568 110 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 UBBP3-201ENST00000445497 241 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RPS4XP2-201ENST00000458402 793 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 SRIP1-201ENST00000489235 288 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RNU6-965P-201ENST00000516721 96 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 RNU2-12P-201ENST00000517216 168 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 AC244205.2-202ENST00000635781 342 ntBASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC85CA6NKD9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.14-201ENST00000362415 103 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 RNU6-454P-201ENST00000364292 107 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 SNORA72.2-201ENST00000365028 127 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.446-201ENST00000384178 104 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 RNU6-975P-201ENST00000384296 105 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 MIR499A-201ENST00000384903 122 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 RNU4-30P-201ENST00000410245 143 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 HMGN2P18-201ENST00000450680 270 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 snoU13.18-201ENST00000459483 104 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 HMGB3P17-201ENST00000504195 649 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 RNU6-1338P-201ENST00000516328 91 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 RNU2-34P-201ENST00000516534 121 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 MIR3684-201ENST00000579779 74 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 MIR4753-201ENST00000585119 83 ntBASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC85CA6NKD9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.136-201ENST00000363444 102 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.188-201ENST00000363952 111 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.286-201ENST00000364813 102 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.350-201ENST00000365409 98 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 RNU6-326P-201ENST00000365480 107 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 SNORA25B-201ENST00000365507 128 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 Y_RNA.361-201ENST00000365515 120 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 RNU2-38P-201ENST00000410856 79 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 AC074290.1-201ENST00000448883 135 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 RN7SL283P-201ENST00000489055 303 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 AC093259.1-201ENST00000509755 300 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 RNA5SP490-201ENST00000517141 136 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 PRELID2P1-201ENST00000552837 301 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 AC110588.1-201ENST00000559699 137 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 SDR42E1P4-201ENST00000620894 481 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.18□□□□□ -1.9
CCDC85CA6NKD9 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms