Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SNORA75B-201ENST00000384053 137 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 RNU6-1207P-201ENST00000384343 107 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 MIR635-201ENST00000384830 98 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 ELOCP21-201ENST00000412558 336 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 AL365184.2-201ENST00000431139 435 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 HSFY7P-201ENST00000432672 318 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 MTND1P4-201ENST00000435196 415 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 HSFY8P-201ENST00000437934 318 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 AC016632.1-201ENST00000503994 196 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 RNU6-469P-201ENST00000516253 101 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 RNA5SP66-201ENST00000517178 101 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 MIR4752-201ENST00000579672 72 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 AC104260.1-201ENST00000616660 539 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 AC091304.10-201ENST00000641554 121 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 MIR544A-201ENST00000384855 91 ntBASIC-1.66□□□□□ -2.68
LINC01549A6NIU2 AL355994.1-201ENST00000424379 260 ntBASIC-1.66□□□□□ -2.68
LINC01549A6NIU2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-1.66□□□□□ -2.68
LINC01549A6NIU2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-1.66□□□□□ -2.68
LINC01549A6NIU2 MTCO1P31-201ENST00000506355 492 ntBASIC-1.66□□□□□ -2.68
LINC01549A6NIU2 AC023442.1-201ENST00000531247 422 ntBASIC-1.66□□□□□ -2.68
LINC01549A6NIU2 MIR4753-201ENST00000585119 83 ntBASIC-1.66□□□□□ -2.68
LINC01549A6NIU2 AC010999.1-201ENST00000611856 324 ntBASIC-1.66□□□□□ -2.68
LINC01549A6NIU2 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 MIR377-201ENST00000362145 69 ntBASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 SNORD114-15-201ENST00000364687 72 ntBASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 RNU4-56P-201ENST00000364700 142 ntBASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 AC092427.1-201ENST00000439177 601 ntBASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 AC114982.2-201ENST00000461396 358 ntBASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 AC021146.6-201ENST00000514659 117 ntBASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 AP001372.4-201ENST00000524889 472 ntBASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-1.67□□□□□ -2.68
LINC01549A6NIU2 Y_RNA.687-201ENST00000516558 91 ntBASIC-1.68□□□□□ -2.68
LINC01549A6NIU2 RNU6-889P-201ENST00000517189 103 ntBASIC-1.68□□□□□ -2.68
LINC01549A6NIU2 RNU7-128P-201ENST00000517247 62 ntBASIC-1.68□□□□□ -2.68
LINC01549A6NIU2 AP003168.1-201ENST00000530091 307 ntBASIC-1.68□□□□□ -2.68
LINC01549A6NIU2 MIR3923-201ENST00000579521 83 ntBASIC-1.68□□□□□ -2.68
LINC01549A6NIU2 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 RNU6-252P-201ENST00000363232 107 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 SUMO1P3-201ENST00000439961 304 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 NDUFB1P2-201ENST00000449477 176 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 RNU7-102P-201ENST00000458948 62 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 SNORA74.3-201ENST00000517108 154 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 MTND1P36-201ENST00000522384 936 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 MTND2P38-201ENST00000522536 667 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 AC138749.4-201ENST00000563970 127 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 AC012433.1-201ENST00000588916 398 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 Z99497.2-201ENST00000603634 310 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 AC006441.5-201ENST00000612680 209 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 MIR6507-201ENST00000613630 70 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 AL008636.1-201ENST00000625038 1018 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 MIR1322-201ENST00000638013 71 ntBASIC-1.69□□□□□ -2.68
LINC01549A6NIU2 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 RNU4-36P-201ENST00000364294 144 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 MIR549A-201ENST00000385268 96 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 SNORA26.5-201ENST00000391215 123 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 MIR1265-201ENST00000408444 86 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 RNU6-881P-201ENST00000516813 102 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 MIR548AX-201ENST00000580117 73 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 U7.6-201ENST00000610841 64 ntBASIC-1.7□□□□□ -2.68
LINC01549A6NIU2 RNU4-21P-201ENST00000362802 126 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 MIR10A-201ENST00000385043 110 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-447P-201ENST00000410293 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-1118P-201ENST00000410382 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-1076P-201ENST00000410397 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-355P-201ENST00000410427 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-791P-201ENST00000410467 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-705P-201ENST00000410601 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-1100P-201ENST00000410691 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-860P-201ENST00000410860 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-1217P-201ENST00000411276 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-785P-201ENST00000411324 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-953P-201ENST00000459154 107 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 AC079395.1-201ENST00000510981 262 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 AC112206.4-201ENST00000515142 405 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU7-28P-201ENST00000516759 62 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-448P-201ENST00000517052 107 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 RPL21P9-201ENST00000556149 474 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 VN1R87P-201ENST00000596706 487 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 AL158042.1-201ENST00000605338 460 ntBASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC-1.71□□□□□ -2.68
LINC01549A6NIU2 U6.90-201ENST00000614007 104 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms