Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 RNU6-1310P-201ENST00000384153 107 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 Y_RNA.645-201ENST00000391229 102 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.19□□□□□ -2.06
HMX3A6NHT5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 AC099677.2-201ENST00000436385 175 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 HMGN2P34-201ENST00000437647 269 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 RPL23AP3-201ENST00000453844 468 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.19□□□□□ -2.06
HMX3A6NHT5 YWHAEP4-201ENST00000505390 198 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.19□□□□□ -2.06
HMX3A6NHT5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.19□□□□□ -2.06
HMX3A6NHT5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.19□□□□□ -2.06
HMX3A6NHT5 MIR3684-201ENST00000579779 74 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 MIR4325-201ENST00000583049 90 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 AL390123.1-201ENST00000603216 237 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 MIR338-201ENST00000636369 67 ntBASIC2.19□□□□□ -2.06
HMX3A6NHT5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HMX3A6NHT5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMX3A6NHT5 ZNF702P-202ENST00000434269 1966 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HMX3A6NHT5 MIRLET7G-201ENST00000362280 84 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 Y_RNA.202-201ENST00000364083 110 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 RNU4-50P-201ENST00000364361 141 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 AC117470.1-201ENST00000381974 330 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 SNORA48.5-201ENST00000391143 135 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 MRPL42P3-201ENST00000401492 326 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 CST2P1-201ENST00000425770 87 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 AL513328.1-201ENST00000446460 224 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 RNU6-1146P-201ENST00000516282 102 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 RNVU1-2-201ENST00000516326 135 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 SNORA70.24-201ENST00000517233 118 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.18□□□□□ -2.06
HMX3A6NHT5 AC022432.1-201ENST00000595739 310 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.18□□□□□ -2.06
HMX3A6NHT5 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.18□□□□□ -2.06
HMX3A6NHT5 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMX3A6NHT5 RNU6-1266P-201ENST00000362794 105 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 RNU6-454P-201ENST00000364292 107 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 Y_RNA.458-201ENST00000384240 102 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 RNU6-301P-201ENST00000384277 107 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 SNORA44-201ENST00000384584 132 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 AL512604.1-201ENST00000404812 257 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 RNA5SP475-201ENST00000410568 110 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 AL158823.1-201ENST00000418441 478 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.17□□□□□ -2.06
HMX3A6NHT5 RNA5SP282-201ENST00000516355 108 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 AC022616.4-201ENST00000522985 181 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.17□□□□□ -2.06
HMX3A6NHT5 AC055872.1-201ENST00000570978 278 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.17□□□□□ -2.06
HMX3A6NHT5 AC104695.3-201ENST00000604052 296 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.17□□□□□ -2.06
HMX3A6NHT5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMX3A6NHT5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
HMX3A6NHT5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HMX3A6NHT5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HMX3A6NHT5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HMX3A6NHT5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HMX3A6NHT5 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 RNU6-862P-201ENST00000362804 105 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 Y_RNA.287-201ENST00000364853 94 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 Y_RNA.333-201ENST00000365274 102 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 Y_RNA.424-201ENST00000384063 103 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 MIR128-1-201ENST00000384921 82 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 MIR17-201ENST00000385012 84 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.16□□□□□ -2.06
HMX3A6NHT5 SNORD65B-201ENST00000459126 73 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 S100A11P2-201ENST00000467589 312 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 AC090255.1-201ENST00000495779 349 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 RNU6-1137P-201ENST00000517073 99 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 SNORD53-201ENST00000579969 78 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 AC005828.6-201ENST00000606610 232 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 AC040896.1-201ENST00000613819 479 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 AC006435.5-201ENST00000624486 112 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.16□□□□□ -2.06
HMX3A6NHT5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HMX3A6NHT5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HMX3A6NHT5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.15□□□□□ -2.06
HMX3A6NHT5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.06
HMX3A6NHT5 MTND4P1-201ENST00000457501 1466 ntBASIC2.15□□□□□ -2.06
HMX3A6NHT5 MIR21-201ENST00000362134 72 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 RNA5SP276-201ENST00000362580 94 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 RNU6-626P-201ENST00000363354 107 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 Y_RNA.158-201ENST00000363651 101 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 RNU1-96P-201ENST00000364163 162 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 Y_RNA.230-201ENST00000364348 109 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 RNU1-112P-201ENST00000364401 164 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 SNORA70.4-201ENST00000365509 134 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 RNU6-20P-201ENST00000384106 107 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 SNORA9-201ENST00000384215 133 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 SNORA8-201ENST00000384574 139 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 RNU6-1011P-201ENST00000384668 107 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 RNU6-823P-201ENST00000391042 103 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 AL079342.1-201ENST00000401460 267 ntBASIC2.15□□□□□ -2.07
HMX3A6NHT5 AL138827.1-201ENST00000402666 306 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms