Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Pdlim2Q8R1G6 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pdlim2Q8R1G6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pdlim2Q8R1G6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pdlim2Q8R1G6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Gm43509-201ENSMUST00000196551 2594 ntBASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Gm10517-202ENSMUST00000192970 758 ntBASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Rab3c-203ENSMUST00000224180 967 ntBASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pdlim2Q8R1G6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pdlim2Q8R1G6 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms