Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.69■□□□□ 0.1
Scn4bQ7M729 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Gm6345-202ENSMUST00000180900 204 ntBASIC15.69■□□□□ 0.1
Scn4bQ7M729 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.69■□□□□ 0.1
Scn4bQ7M729 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Scn4bQ7M729 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Gm44430-201ENSMUST00000203376 995 ntBASIC15.68■□□□□ 0.1
Scn4bQ7M729 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.68■□□□□ 0.1
Scn4bQ7M729 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn4bQ7M729 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.67■□□□□ 0.1
Scn4bQ7M729 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn4bQ7M729 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn4bQ7M729 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn4bQ7M729 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.66■□□□□ 0.1
Scn4bQ7M729 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn4bQ7M729 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.66■□□□□ 0.1
Scn4bQ7M729 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn4bQ7M729 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn4bQ7M729 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Scn4bQ7M729 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn4bQ7M729 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn4bQ7M729 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn4bQ7M729 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms